Evidence map›Paper›PMID 40312560›Full record

ArticleEMBO reports2025

DPP8/9 processing of human AK2 unmasks an IAP binding motif.

Kim J Lapacz, Konstantin Weiss, Franziska Mueller, Yuxing Xue, Simon Poepsel, Matthias Weith, Tanja Bange, Jan Riemer

Abstract read
In one paragraph

Article in EMBO reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Redox signals and oxidative stress in the control of mitochondrial protein import.Protein science : a publication of the Protein Society · 2026
    Review
  2. In and out of the mitochondrial intermembrane space.Protein science : a publication of the Protein Society · 2026
    Review
  3. Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Kim J Lapacz *Redox Metabolism Group, Institute for Biochemistry, University of Cologne, 50674, Cologne, Germany.ORCID 0000-0002-2494-4124
Konstantin Weiss *Redox Metabolism Group, Institute for Biochemistry, University of Cologne, 50674, Cologne, Germany.ORCID 0000-0003-4895-9459
Franziska Mueller *Department of Mechanistic Cell Biology, Max Planck Institute of Molecular Physiology, 44227, Dortmund, Germany.ORCID 0000-0002-4880-9269
Yuxing XueInstitute of Medical Psychology and Biomedical Center (BMC), Faculty of Medicine, LMU Munich, 80336, Munich, Germany.
Simon PoepselCenter for Molecular Medicine Cologne (CMMC), Faculty of Medicine and University Hospital, University of Cologne, 50931, Cologne, Germany.ORCID 0000-0002-8304-4062
Matthias WeithRedox Metabolism Group, Institute for Biochemistry, University of Cologne, 50674, Cologne, Germany.ORCID 0000-0003-0804-4262
Tanja BangeInstitute of Medical Psychology and Biomedical Center (BMC), Faculty of Medicine, LMU Munich, 80336, Munich, Germany. tanja.bange@med.uni-muenchen.de.ORCID 0000-0002-9680-8586
Jan RiemerRedox Metabolism Group, Institute for Biochemistry, University of Cologne, 50674, Cologne, Germany. jan.riemer@uni-koeln.de.ORCID 0000-0002-7574-8457

Funding

Deutsche Forschungsgemeinschaft (DFG) 251546152Deutsche Forschungsgemeinschaft (DFG) 269925409Deutsche Forschungsgemeinschaft (DFG) 411422114Deutsche Forschungsgemeinschaft (DFG) 424228829Deutsche Forschungsgemeinschaft (DFG) 435235019Deutsche Forschungsgemeinschaft (DFG) 5041140321Deutsche Forschungsgemeinschaft (DFG) INST 86/1800-1State of NRW, Germany CANTAR network
6 · The paper itself

Abstract

Adenylate kinase 2 (AK2) is localized in the intermembrane space of mitochondria, where it ensures efficient adenine nucleotide exchange between cytosol and mitochondria. For mitochondrial import, AK2 relies on the MIA40 disulphide relay system. Its cytosolic stability is subject to regulation through N-terminal processing by the dipeptidyl peptidases DPP8 and DPP9, which sensitize AK2 for proteasomal degradation. Here, we find that cytosolic AK2 degradation is mediated by Inhibitors of Apoptosis (IAPs), a class of E3 ligases that interacts with target proteins by binding to IAP-binding motifs (IBM). We have identified an IBM at the very end of AK2's novel N-terminus, which becomes exposed due to processing by DPP8/9. N-terminal acetylation mediated by the N-acetyltransferase NatA prevents this AK2-IAP interaction, therefore stabilizing AK2 in the cytosol. Performing a genome-wide in silico screen, we could identify 129 potential substrates in which an IBM becomes potentially unmasked by DPP8/9 processing. For one of these potential substrates, EIF2A, we demonstrate its targeting to IAPs after IBM exposure by DPP8/9 indicating that DPP8/9-mediated unmasking of IBMs is a general phenomenon.

Indexed as

Adenylate KinaseDipeptidyl-Peptidases and Tripeptidyl-PeptidasesProtein Processing, Post-TranslationalAcetylationAmino Acid MotifsCytosolEukaryotic Initiation Factor-2HEK293 CellsHexokinaseHumansMitochondriaProtein BindingProteolysisAdenylate KinaseDipeptidyl-Peptidases and Tripeptidyl-PeptidasesDPP9 protein, humanEukaryotic Initiation Factor-2HexokinaseHK2 protein, humanAK2DPP9IAP‐binding MotifInhibitor of Apoptosis (IAP) ProteinsN-terminal Acetylation

Identifiers

PMID40312560
PMCPMC12152192

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.