Evidence map›Paper›PMID 40312467›Full record

ArticleNature communications2025

Altered extracellular matrix structure and elevated stiffness in a brain organoid model for disease.

Maayan Karlinski Zur, Bidisha Bhattacharya, Inna Solomonov, Sivan Ben Dror, Alon Savidor, Yishai Levin, Amir Prior, Tamar Sapir, Talia Harris, Tsviya Olender and 5 more

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Review
  6. Review
  7. Mechanomedicine: Present state and future promise.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Maayan Karlinski ZurDepartment of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel.ORCID http://orcid.org/0009-0008-4539-5014
Bidisha BhattacharyaDepartment of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel.ORCID http://orcid.org/0009-0001-1294-1516
Inna SolomonovDepartment of Immunology and Regenerative Biology, Weizmann Institute of Science, Rehovot, Israel.ORCID http://orcid.org/0000-0003-2486-1350
Sivan Ben DrorThe Institute of Life Sciences, The Hebrew University of Jerusalem, The Edmond J. Safra Campus, Jerusalem, Israel.
Alon SavidorThe De Botton Protein Profiling Institute of the Nancy and Stephen Grand Israel National Center for Personalized Medicine, Weizmann Institute of Science, Rehovot, Israel.ORCID http://orcid.org/0000-0001-8884-6948
Yishai LevinThe De Botton Protein Profiling Institute of the Nancy and Stephen Grand Israel National Center for Personalized Medicine, Weizmann Institute of Science, Rehovot, Israel.
Amir PriorThe De Botton Protein Profiling Institute of the Nancy and Stephen Grand Israel National Center for Personalized Medicine, Weizmann Institute of Science, Rehovot, Israel.ORCID http://orcid.org/0000-0002-2638-0772
Tamar SapirDepartment of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel.
Talia HarrisDepartment of Chemical Research Support, Weizmann Institute of Science, Rehovot, Israel.
Tsviya OlenderDepartment of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel.
Rita SchmidtDepartment of Brain Sciences, Weizmann Institute of Science, Rehovot, Israel.ORCID http://orcid.org/0000-0003-1580-9964
J M SchwarzPhysics Department, Syracuse University, Syracuse, NY, USA.
Irit SagiDepartment of Immunology and Regenerative Biology, Weizmann Institute of Science, Rehovot, Israel. Irit.Sagi@weizmann.ac.il.ORCID http://orcid.org/0000-0002-4912-4579
Amnon BuxboimThe Institute of Life Sciences, The Hebrew University of Jerusalem, The Edmond J. Safra Campus, Jerusalem, Israel. amnon.buxboim@mail.huji.ac.il.ORCID http://orcid.org/0000-0003-2412-9792
Orly ReinerDepartment of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel. orly.reiner@weizmann.ac.il.ORCID http://orcid.org/0000-0001-7560-9599

Funding

Alzheimer's Association AARG-NTF-21-849529
6 · The paper itself

Abstract

The viscoelastic properties of tissues influence their morphology and cellular behavior, yet little is known about changes in these properties during brain malformations. Lissencephaly, a severe cortical malformation caused by LIS1 mutations, results in a smooth cortex. Here, we show that human-derived brain organoids with LIS1 mutation exhibit increased stiffness compared to controls at multiple developmental stages. This stiffening correlates with abnormal extracellular matrix (ECM) expression and organization, as well as elevated water content, measured by diffusion-weighted MRI. Short-term MMP9 treatment reduces both stiffness and water diffusion levels to control values. Additionally, a computational microstructure mechanical model predicts mechanical changes based on ECM organization. These findings suggest that LIS1 plays a critical role in ECM regulation during brain development and that its mutation leads to significant viscoelastic alterations.

Indexed as

BrainExtracellular MatrixOrganoidsDiffusion Magnetic Resonance ImagingElasticityHumansMatrix Metalloproteinase 9MutationMatrix Metalloproteinase 9MMP9 protein, human

Identifiers

PMID40312467
PMCPMC12045990

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.