Evidence map›Paper›PMID 40312422›Full record

ArticleNature communications2025

T cell toxicity induced by tigecycline binding to the mitochondrial ribosome.

Qiuya Shao, Anas Khawaja, Minh Duc Nguyen, Vivek Singh, Jingdian Zhang, Yong Liu, Joel Nordin, Monika Adori, C Axel Innis, Xaquin Castro Dopico and 1 more

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Qiuya Shao *Department of Urology, The First Affiliated Hospital of Xi'an Jiaotong University, Xi'an, China.
Anas Khawaja *Department of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden.ORCID http://orcid.org/0000-0002-9721-7454
Minh Duc Nguyen *Department of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden.ORCID http://orcid.org/0000-0003-2945-9707
Vivek SinghDepartment of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden.ORCID http://orcid.org/0000-0003-4656-3362
Jingdian ZhangDepartment of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden.
Yong LiuDepartment of Laboratory Medicine, Karolinska Institutet, Huddinge, Sweden.ORCID http://orcid.org/0000-0002-0574-2877
Joel NordinDepartment of Laboratory Medicine, Karolinska Institutet, Huddinge, Sweden.ORCID http://orcid.org/0000-0002-3653-7710
Monika AdoriDepartment of Microbiology, Tumor and Cell Biology, Karolinska Institutet, Stockholm, Sweden.
C Axel InnisARNA Laboratory, Univ. Bordeaux, Centre National de la Recherche Scientifique, Institut National de la Santé et de la Recherche Médicale, Bordeaux, France.ORCID http://orcid.org/0000-0003-3153-9490
Xaquin Castro DopicoDepartment of Microbiology, Tumor and Cell Biology, Karolinska Institutet, Stockholm, Sweden. xcd@anivet.au.dk.ORCID http://orcid.org/0000-0002-9005-6774
Joanna RorbachDepartment of Medical Biochemistry and Biophysics, Karolinska Institutet, Stockholm, Sweden. joanna.rorbach@ki.se.ORCID http://orcid.org/0000-0002-2891-2840

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tetracyclines are essential bacterial protein synthesis inhibitors under continual development to combat antibiotic resistance yet suffer from unwanted side effects. Mitoribosomes - responsible for generating oxidative phosphorylation (OXPHOS) subunits - share structural similarities with bacterial machinery and may suffer from cross-reactivity. Since lymphocytes rely upon OXPHOS upregulation to establish immunity, we set out to assess the impact of ribosome-targeting antibiotics on human T cells. We find tigecycline, a third-generation tetracycline, to be the most cytotoxic compound tested. In vitro, 5-10 μM tigecycline inhibits mitochondrial but not cytosolic translation, mitochondrial complex I, III and IV expression, and curtails the activation and expansion of unique T cell subsets. By cryo-EM, we find tigecycline to occupy three sites on T cell mitoribosomes. In addition to the conserved A-site found in bacteria, tigecycline also attaches to the peptidyl transferase center of the large subunit. Furthermore, a third, distinct binding site on the large subunit, aligns with helices analogous to those in bacteria, albeit lacking methylation in humans. The data provide a mechanism to explain part of the anti-inflammatory effects of these drugs and inform antibiotic design.

Indexed as

Anti-Bacterial AgentsMinocyclineMitochondrial RibosomesTigecyclineT-LymphocytesBinding SitesCryoelectron MicroscopyHumansMitochondriaOxidative PhosphorylationProtein BiosynthesisAnti-Bacterial AgentsMinocyclineTigecycline

Identifiers

PMID40312422
PMCPMC12045974

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.