Evidence map›Paper›PMID 40311619›Full record

ArticleCell2025

tRNA modifications tune m

Bastian Linder, Puneet Sharma, Jie Wu, Tosca Birbaumer, Cristian Eggers, Shino Murakami, Roman E Ott, Kai Fenzl, Hannah Vorgerd, Florian Erhard and 3 more

Abstract read
In one paragraph

Article in Cell, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed.

  1. NAR cancer · 2026
    Article
  2. Review
  3. mNature reviews. Neuroscience · 2026
    Review
  4. Single-molecule mbioRxiv : the preprint server for biology · 2026
    Article
  5. RNA modifications in cancer and their detection: a review.Japanese journal of clinical oncology · 2026
    Review
  6. CDS-localized mNature plants · 2026
    Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Ribosome-associated quality control and related mechanisms.Nature structural & molecular biology · 2026
    Review
  13. High-stoichiometry mRNA (New York, N.Y.) · 2026
    Article
  14. Quality control and signaling pathways at stalled ribosomes.Experimental & molecular medicine · 2026
    Review
  15. NNature reviews. Cancer · 2026
    Review
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Bastian LinderGenome Biology Unit, European Molecular Biology Laboratory (EMBL), 69117 Heidelberg, Germany.
Puneet SharmaMax-Planck-Research Group for RNA Biology, Max Planck Institute for Molecular Biomedicine, 48149 Münster, Germany; Department of Chemistry, Biochemistry and Pharmaceutical Sciences, University of Bern, 3012 Bern, Switzerland.
Jie WuMax-Planck-Research Group for RNA Biology, Max Planck Institute for Molecular Biomedicine, 48149 Münster, Germany; Department of Chemistry, Biochemistry and Pharmaceutical Sciences, University of Bern, 3012 Bern, Switzerland; The Graduate School for Cellular and Biomedical Sciences (GCB), University of Bern, 3012 Bern, Switzerland; Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA.
Tosca BirbaumerDepartment of Chemistry, Biochemistry and Pharmaceutical Sciences, University of Bern, 3012 Bern, Switzerland; The Graduate School for Cellular and Biomedical Sciences (GCB), University of Bern, 3012 Bern, Switzerland.
Cristian EggersDepartment of Chemistry, Biochemistry and Pharmaceutical Sciences, University of Bern, 3012 Bern, Switzerland.
Shino MurakamiDepartment of Pharmacology, Weill Cornell Medicine, Cornell University, New York, NY 10065, USA.
Roman E OttDepartment of Chemistry, Biochemistry and Pharmaceutical Sciences, University of Bern, 3012 Bern, Switzerland.
Kai FenzlGenome Biology Unit, European Molecular Biology Laboratory (EMBL), 69117 Heidelberg, Germany.
Hannah VorgerdMax-Planck-Research Group for RNA Biology, Max Planck Institute for Molecular Biomedicine, 48149 Münster, Germany.
Florian ErhardInstitute of Virology and Immunobiology, University of Würzburg, 97078 Würzburg, Germany; Chair of Computational Immunology, University of Regensburg, 93053 Regensburg, Germany.
Samie R JaffreyDepartment of Pharmacology, Weill Cornell Medicine, Cornell University, New York, NY 10065, USA.
Sebastian A LeidelMax-Planck-Research Group for RNA Biology, Max Planck Institute for Molecular Biomedicine, 48149 Münster, Germany; Department of Chemistry, Biochemistry and Pharmaceutical Sciences, University of Bern, 3012 Bern, Switzerland. Electronic address: sebastian.leidel@unibe.ch.
Lars M SteinmetzGenome Biology Unit, European Molecular Biology Laboratory (EMBL), 69117 Heidelberg, Germany; Stanford Genome Technology Center, Stanford University, Palo Alto, CA 94304, USA; Department of Genetics, School of Medicine, Stanford University, Stanford, CA 94305, USA. Electronic address: larsms@stanford.edu.

Funding

Center for Multi-Scale Analysis of the Human EpitranscriptomeRM1HG011563 · NHGRI · WEILL MEDICAL COLL OF CORNELL UNIV · PI SAMIE R JAFFREY, Kathryn D Meyer · 2021 to 2026
$22.2M
New mechanisms and technologies for understanding post-transcriptional gene regulation in neuronsR35NS111631 · NINDS · WEILL MEDICAL COLL OF CORNELL UNIV · PI SAMIE R JAFFREY · 2019 to 2026
$8.6M
Ultra-sensitive multi-mode laser-scanning imaging systemS10OD030335 · OD · WEILL MEDICAL COLL OF CORNELL UNIV · PI JAFFREY, SAMIE R · 2021 to 2021
$163k
NHGRI NIH HHS RM1 HG011563NIH HHS S10 OD030335NINDS NIH HHS R35 NS111631
6 · The paper itself

Abstract

Chemically modified nucleotides in mRNA are critical regulators of gene expression, primarily through interactions with reader proteins that bind to these modifications. Here, we present a mechanism by which the epitranscriptomic mark N

Indexed as

AdenosineRNA, MessengerRNA StabilityRNA, TransferAnimalsCell Line, TumorHumansNeoplasmsProtein BiosynthesisRibosomesRNA Processing, Post-TranscriptionalThiouridineTranscriptomeAdenosineN-methyladenosineRNA, MessengerRNA, TransferThiouridinecancerepitranscriptomem(6)Amcm(5)s(2)UmRNA decaymRNA translationN(6)-methyladenosineoncogenic signalingribosome collisionstRNA modification

Identifiers

PMID40311619
PMCPMC12255531

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.