Evidence map›Paper›PMID 40309066›Full record

ArticleRSC chemical biology2025

Proximity-induced SuFEx increases the potency of cytosolic nucleotidase inhibitors and reveals a rare example of covalently targeted histidine.

Mikolaj Chrominski, Marcin Warminski, Mateusz Kozarski, Dorota Kubacka, Joanna Panecka-Hofman, Tomasz Spiewla, Mikolaj Zmudzinski, Jacek Jemeility, Joanna Kowalska

Erratum issuedAbstract read
In one paragraph

Article in RSC chemical biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors.

Mikolaj ChrominskiCentre of New Technologies, University of Warsaw Banacha 2c 02-097 Warsaw Poland m.chrominski@cent.uw.edu.pl.ORCID https://orcid.org/0000-0002-4689-5730
Marcin WarminskiDivision of Biophysics, Faculty of Physics University of Warsaw, Pasteura 5 02-093 Warsaw Poland jkowalska@fuw.edu.pl.ORCID https://orcid.org/0000-0002-1071-3405
Mateusz KozarskiCentre of New Technologies, University of Warsaw Banacha 2c 02-097 Warsaw Poland m.chrominski@cent.uw.edu.pl.
Dorota KubackaDivision of Biophysics, Faculty of Physics University of Warsaw, Pasteura 5 02-093 Warsaw Poland jkowalska@fuw.edu.pl.ORCID https://orcid.org/0000-0003-0421-0470
Joanna Panecka-HofmanDivision of Biophysics, Faculty of Physics University of Warsaw, Pasteura 5 02-093 Warsaw Poland jkowalska@fuw.edu.pl.
Tomasz SpiewlaCentre of New Technologies, University of Warsaw Banacha 2c 02-097 Warsaw Poland m.chrominski@cent.uw.edu.pl.
Mikolaj ZmudzinskiCentre of New Technologies, University of Warsaw Banacha 2c 02-097 Warsaw Poland m.chrominski@cent.uw.edu.pl.ORCID https://orcid.org/0000-0002-9792-9160
Jacek JemeilityCentre of New Technologies, University of Warsaw Banacha 2c 02-097 Warsaw Poland m.chrominski@cent.uw.edu.pl.ORCID https://orcid.org/0000-0001-7633-788X
Joanna KowalskaDivision of Biophysics, Faculty of Physics University of Warsaw, Pasteura 5 02-093 Warsaw Poland jkowalska@fuw.edu.pl.ORCID https://orcid.org/0000-0002-9174-7999

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Structure-guided design is one of the most validated solutions for targeting proteins with specific ligands for therapeutic purposes. Nevertheless, it remains challenging to target enzymes with low affinity for their natural ligands and specificities that overlap with those of other proteins. Cytosolic 5'-nucleotidases - involved in the metabolism of nucleic acid derivatives - are an example of such a family. Here we illustrate how precisely designed covalent inhibitors represent a potential solution for selective nucleotidase targeting. We employed the sulfur-fluoride exchange (SuFEx) to develop a covalent inhibitor of cytosolic nucleotidase IIIB (cNIIIB). Using the known inhibitor (7-benzylguanosine monophosphate, Bn

Identifiers

PMID40309066
PMCPMC12039336

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.