Evidence map›Paper›PMID 40309007›Full record

ArticleFrontiers in molecular biosciences2025

Francisco J Gómez-Zaldívar, Luis Córdova-Bahena, Angel J Ruiz-Moreno, Paolo Ceppi, Marco A Velasco-Velázquez

Abstract read
In one paragraph

Article in Frontiers in molecular biosciences, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Francisco J Gómez-ZaldívarSchool of Medicine, Universidad Nacional Autónoma de México (UNAM), Mexico City, Mexico.
Luis Córdova-BahenaSchool of Medicine, Universidad Nacional Autónoma de México (UNAM), Mexico City, Mexico.
Angel J Ruiz-MorenoSchool of Medicine, Universidad Nacional Autónoma de México (UNAM), Mexico City, Mexico.
Paolo CeppiInterdisciplinary Center for Clinical Research (IZKF), Friedrich-Alexander Universität Erlangen-Nürnberg, Erlangen, Germany.
Marco A Velasco-VelázquezSchool of Medicine, Universidad Nacional Autónoma de México (UNAM), Mexico City, Mexico.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The aldo-keto reductase family 1 member B1 (AKR1B1) plays a key role in cancer progression by competing with histone deacetylase 3 to bind to the deacetylase activation domain (DAD) of the nuclear receptor corepressor SMRT. Previous studies showed that the L289A mutation in AKR1B1 disrupts its ability to form a dimer with DAD but further details of this interaction remain uncharacterized. This study aimed to model the DAD/AKR1B1 dimer by molecular docking and characterize the complex using molecular dynamics simulations. We identified a new model with increased structural stability for AKR1B1, reduced disruption of secondary structures of DAD, and lower ΔG than a previously reported one.

Indexed as

AKR1B1binding sites predictiondeacetylase activation domainin silico mutagenesismolecular dynamicsnuclear receptor corepressorprotein-protein interaction

Identifiers

PMID40309007
PMCPMC12040874

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.