Evidence map›Paper›PMID 40304996›Full record

ArticleInternational urology and nephrology2025

Identification of druggable genetic targets for prostate cancer risk based on mendelian randomization and single-cell RNA sequencing.

Liantai Song, Xinyang He, Yibing Duan, Yifan Chi, Reng Li, Cancan Li, Yutian Liu, Mengxin Yang, Jiameng Wei, Yujia Zhao and 1 more

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Article in International urology and nephrology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors.

Liantai SongChengde Medical University, Chengde, 067000, China.
Xinyang HeChengde Medical University, Chengde, 067000, China.
Yibing Duan *Chengde Medical University, Chengde, 067000, China.
Yifan ChiChengde Medical University, Chengde, 067000, China.
Reng Li *Chengde Medical University, Chengde, 067000, China.
Cancan LiChengde Medical University, Chengde, 067000, China.
Yutian LiuChengde Medical University, Chengde, 067000, China.
Mengxin YangChengde Medical University, Chengde, 067000, China.
Jiameng WeiChengde Medical University, Chengde, 067000, China.
Yujia ZhaoChengde Medical University, Chengde, 067000, China.
Qian XuChengde Medical University, Chengde, 067000, China. sdwssnow@163.com.

Funding

Chengde Medical University 2024017
6 · The paper itself

Abstract

purposeThis study aimed to identify genetic targets linked to prostate cancer risk using advanced genetic analysis techniques.

objectiveThe goal was to conduct a comprehensive analysis using Mendelian Randomization (MR), colocalization, and single-cell RNA sequencing to identify druggable genes as potential therapeutic targets or diagnostic markers.

methodsThe study involved selecting 2608 druggable genes by intersecting expression Quantitative Trait Loci (eQTLs) with druggable genome databases. MR analysis using prostate cancer GWAS data identified genes with causal associations to prostate cancer risk. Colocalization analysis confirmed shared genetic variants influencing both the exposure and outcome. Single-cell RNA sequencing assessed gene expression in prostate tumor cell types, while a phenome-wide association study (PheWAS) evaluated potential side effects.

resultsMR analysis identified 58 genes associated with prostate cancer risk, with 12 validated by colocalization analysis. Five genes (BAK1, ATP1B2, PEMT, TPM3, ZDHHC7) demonstrated strong colocalization, indicating potential as drug targets. Single-cell RNA sequencing revealed their enrichment in prostate tumor T cells and macrophages. PheWAS suggested minimal side effects for most, except BAK1, which was linked to increased platelet counts.

conclusionThis study identified several genetic targets associated with prostate cancer risk, highlighting the potential for targeted therapy. By integrating Mendelian randomization analysis, colocalization analysis, and single-cell RNA sequencing, the accuracy of target validation was improved, which may provide new directions for targeted therapy in prostate cancer.

Indexed as

Mendelian Randomization AnalysisProstatic NeoplasmsSequence Analysis, RNAGenome-Wide Association StudyHumansMaleQuantitative Trait LociSingle-Cell AnalysisColocalizationDruggable genomeMendelian randomizationPhenome-wide association studiesProstate cancer

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.