Evidence map›Paper›PMID 40303179›Full record

ArticleTransboundary and emerging diseases2024

Genetic Characterization of

Naomi Ariyama, Belén Agüero, Benjamín Bennett, Constanza Urzúa, Felipe Berrios, Claudio Verdugo, Víctor Neira

Abstract read
In one paragraph

Article in Transboundary and emerging diseases, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Naomi AriyamaDepartamento de Medicina Preventiva Animal Facultad de Ciencias Veterinarias y Pecuarias Universidad de Chile, Santiago 8820808, Chile.ORCID https://orcid.org/0000-0002-4713-5979
Belén AgüeroDepartamento de Medicina Preventiva Animal Facultad de Ciencias Veterinarias y Pecuarias Universidad de Chile, Santiago 8820808, Chile.
Benjamín BennettDepartamento de Medicina Preventiva Animal Facultad de Ciencias Veterinarias y Pecuarias Universidad de Chile, Santiago 8820808, Chile.
Constanza UrzúaDepartamento de Medicina Preventiva Animal Facultad de Ciencias Veterinarias y Pecuarias Universidad de Chile, Santiago 8820808, Chile.
Felipe BerriosDepartamento de Medicina Preventiva Animal Facultad de Ciencias Veterinarias y Pecuarias Universidad de Chile, Santiago 8820808, Chile.
Claudio VerdugoInstituto de Patología Animal Facultad de Ciencias Veterinarias Universidad Austral de Chile, Valdivia 5090010, Chile.
Víctor NeiraDepartamento de Medicina Preventiva Animal Facultad de Ciencias Veterinarias y Pecuarias Universidad de Chile, Santiago 8820808, Chile.ORCID https://orcid.org/0000-0001-9062-9969

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Canine distemper virus (CDV) poses a significant threat to dogs and wildlife worldwide, and this study sought to provide an updated genetic characterization of CDV field strains in Chile during 2022-2023. We collected samples from 52 suspected CDV cases in domestic dogs and detected viral RNA through real-time RT-PCR in 28 dogs (54%). Factors like age and vaccination status were determinants of CDV positivity, with young adult and unvaccinated dogs facing a higher infection risk. We isolated CDV from positive samples in VeroDogSLAM cells. From these isolates and direct samples, we obtained sequences and estimated the phylogeny based on gene H. CDV isolates from nasal and conjunctival swabs exhibited cytopathic effects, and sequence analysis unveiled a substantial genetic diversity among the strains. Chilean CDV strains demonstrated a genetic distance to vaccine strains of approximately 10%, antigenic-change-related amino acid substitutions, and novel putative glycosylation sites. In the phylogeny, Chilean CDV field strains clustered into two lineages, Europe/South America-1 and North/South America-4, indicating the emergence of the North/South America-4 lineage in Chile and underscoring the genetic complexity of CDV in the country. Interestingly, certain Chilean viruses shared a close common ancestor with Brazilian and Peruvian viruses, suggesting viral spreading patterns. Further investigations are warranted to comprehend the potential antigenic implications of these genetically diverse CDV strains.

Indexed as

DistemperDistemper Virus, CanineAnimalsChileDogsFemaleGenetic VariationMalePhylogenyRNA, ViralRNA, Viral

Identifiers

PMID40303179
PMCPMC12017005

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.