Evidence map›Paper›PMID 40303176›Full record

ArticleTransboundary and emerging diseases2024

Isolation and Pathogenicity of a Chinese Porcine Astrovirus Type 5 Strain HNPDS-01 and Its Influence on Cecum Microbiota in Piglets.

Zehui Li, Xingyi Wu, Yunfei Zhang, Qianqian Li, Junlong Gao, Yixin Hu, Jin Yuan, Hui Hu, Xiaohui Jin, Zhanyong Wei

Abstract read
In one paragraph

Article in Transboundary and emerging diseases, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Zehui LiThe College of Veterinary Medicine, Henan Agricultural University, Zhengzhou 450002, Henan, China.ORCID https://orcid.org/0009-0003-6090-8299
Xingyi WuThe College of Veterinary Medicine, Henan Agricultural University, Zhengzhou 450002, Henan, China.
Yunfei ZhangThe College of Veterinary Medicine, Henan Agricultural University, Zhengzhou 450002, Henan, China.
Qianqian LiThe College of Veterinary Medicine, Henan Agricultural University, Zhengzhou 450002, Henan, China.
Junlong GaoThe College of Veterinary Medicine, Henan Agricultural University, Zhengzhou 450002, Henan, China.
Yixin HuThe College of Veterinary Medicine, Henan Agricultural University, Zhengzhou 450002, Henan, China.
Jin YuanThe College of Veterinary Medicine, Henan Agricultural University, Zhengzhou 450002, Henan, China.
Hui HuThe College of Veterinary Medicine, Henan Agricultural University, Zhengzhou 450002, Henan, China.
Xiaohui JinThe College of Veterinary Medicine, Henan Agricultural University, Zhengzhou 450002, Henan, China.ORCID https://orcid.org/0009-0000-6536-7813
Zhanyong WeiThe College of Veterinary Medicine, Henan Agricultural University, Zhengzhou 450002, Henan, China.ORCID https://orcid.org/0000-0001-8705-6426

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Astroviruses have frequently been found in mammals and poultry, but only a few have been successfully isolated for extensive research. Here, we isolated a strain of porcine astrovirus type 5 (PAstV 5) on LLC-porcine kidney (LLC-PK) cells, from the intestinal contents of diarrhea piglets, namely PAstV 5-HNPDS-01. The complete genome sequence length of this strain was 6,419 nt, which has 77.2%-91.1% nucleotide homology with other PAstV 5 strains and 45.0%-50.0% nucleotide homology with other mammalian astroviruses. The recombination analysis indicated that the recombination events were occurred in ORF 2 region (4,444-5,323 nt) in PAstV 5-HNPDS-01 strain. Subsequently, the pathogenicity of PAstV 5-HNPDS-01 was evaluated in 5-day-old piglets. It showed that the PAstV 5-HNPDS-01 could cause mild diarrhea, growth retardation, minor damage to intestinal villi clinically. Meanwhile, PAstV 5-HNPDS-01 infection could affect the microbiota diversity and composition of cecum in piglet from phylum to genus level. After infected with PAstV 5, there was a significant downregulation of beneficial bacteria, including

Indexed as

AstroviridaeAstroviridae InfectionsCecumGastrointestinal MicrobiomeSwine DiseasesAnimalsChinaGenome, ViralPhylogenySwineVirulence

Identifiers

PMID40303176
PMCPMC12016781

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.