Evidence map›Paper›PMID 40303175›Full record

ArticleTransboundary and emerging diseases2024

Spatiotemporal and Species-Crossing Transmission Dynamics of Subclade 2.3.4.4b H5Nx HPAIVs.

Minghui Li, Jingman Tian, Xiaoli Bai, Xingdong Song, Zhiguo Zhao, Jianzhong Shi, Guohua Deng, Xianying Zeng, Guobin Tian, Huihui Kong and 3 more

Abstract read
In one paragraph

Article in Transboundary and emerging diseases, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Minghui LiState Key Laboratory for Animal Disease Control and Prevention Harbin Veterinary Research Institute Chinese Academy of Agricultural Sciences, Harbin, Heilongjiang province, China.ORCID https://orcid.org/0009-0007-0599-156X
Jingman TianState Key Laboratory for Animal Disease Control and Prevention Harbin Veterinary Research Institute Chinese Academy of Agricultural Sciences, Harbin, Heilongjiang province, China.ORCID https://orcid.org/0000-0002-9981-3604
Xiaoli BaiState Key Laboratory for Animal Disease Control and Prevention Harbin Veterinary Research Institute Chinese Academy of Agricultural Sciences, Harbin, Heilongjiang province, China.ORCID https://orcid.org/0000-0001-6938-0206
Xingdong SongState Key Laboratory for Animal Disease Control and Prevention Harbin Veterinary Research Institute Chinese Academy of Agricultural Sciences, Harbin, Heilongjiang province, China.ORCID https://orcid.org/0009-0003-9579-8667
Zhiguo ZhaoState Key Laboratory for Animal Disease Control and Prevention Harbin Veterinary Research Institute Chinese Academy of Agricultural Sciences, Harbin, Heilongjiang province, China.ORCID https://orcid.org/0009-0004-9913-8129
Jianzhong ShiState Key Laboratory for Animal Disease Control and Prevention Harbin Veterinary Research Institute Chinese Academy of Agricultural Sciences, Harbin, Heilongjiang province, China.
Guohua DengState Key Laboratory for Animal Disease Control and Prevention Harbin Veterinary Research Institute Chinese Academy of Agricultural Sciences, Harbin, Heilongjiang province, China.
Xianying ZengState Key Laboratory for Animal Disease Control and Prevention Harbin Veterinary Research Institute Chinese Academy of Agricultural Sciences, Harbin, Heilongjiang province, China.
Guobin TianState Key Laboratory for Animal Disease Control and Prevention Harbin Veterinary Research Institute Chinese Academy of Agricultural Sciences, Harbin, Heilongjiang province, China.
Huihui KongState Key Laboratory for Animal Disease Control and Prevention Harbin Veterinary Research Institute Chinese Academy of Agricultural Sciences, Harbin, Heilongjiang province, China.ORCID https://orcid.org/0000-0003-3358-3460
Jinxiong LiuState Key Laboratory for Animal Disease Control and Prevention Harbin Veterinary Research Institute Chinese Academy of Agricultural Sciences, Harbin, Heilongjiang province, China.
Chengjun LiState Key Laboratory for Animal Disease Control and Prevention Harbin Veterinary Research Institute Chinese Academy of Agricultural Sciences, Harbin, Heilongjiang province, China.
Yanbing LiState Key Laboratory for Animal Disease Control and Prevention Harbin Veterinary Research Institute Chinese Academy of Agricultural Sciences, Harbin, Heilongjiang province, China.ORCID https://orcid.org/0000-0002-5345-1580

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Subclade 2.3.4.4b H5Nx highly pathogenic avian influenza (HPAI) viruses, emerged in 2013 with multiple subtypes of H5N8, H5N1, and H5N6, had unprecedently caused a global epizootic by H5N1 since 2021, which had devasted multiple species of wild birds, poultry, and wild mammals (terrestrial and marine) with a high mortality, causing severe ecological damage. The infected wild mammals may become new "mixers" for influenza viruses, posing the potential transmission to human. Frequent outbreaks of subclade 2.3.4.4b H5Nx viruses among wild birds and poultry had exposed major gaps in our knowledge on their evolution, spatiotemporal diffusion, and species-crossing transmission. Here, we integrated the phylogenetic and epidemiological data of subclade 2.3.4.4b H5Nx viruses in public database and used Bayesian phylodynamic analysis to reveal the pattern of the global large-scale transmission. Phylogenic analysis demonstrated that the HA gene of these viruses diverged into two dominant clusters around 2015 and 2016. The Bayesian phylodynamic analysis illustrated that the viruses presented spatiotemporally complex transmission network with geographical and host relative expansion and recombination with different subtypes of NA segment. Spatially, the Russian Federation (Siberia) was identified as the primary hub for virus transmission, which was further facilitated by the establishment of strong epidemiological linkages between West Europe and broader regions, such as North America. As for hosts, wild Anseriformes were the primary species for the virus spillover, contributing to the spatial expansion and rapid diffusion globally of subclade 2.3.4.4b viruses. We investigated the phylogeny of subclade 2.3.4.4b H5Nx viruses and the spatiotemporal pattern of transmission with initial location and the primary host, which could provide comprehensive insights for subclade 2.3.4.4b H5Nx viruses. Due to the wild birds involved the widespread of subclade 2.3.4.4b H5Nx viruses, the epizootics in poultry are inevitable, so we highly recommend to apply the policy of culling plus with vaccination to protect the poultry industry and potentially protect the public health.

Indexed as

Influenza A virusInfluenza in BirdsOrthomyxoviridae InfectionsAnimalsAnimals, WildBirdsPhylogenyPoultryRussiaSpatio-Temporal Analysis

Identifiers

PMID40303175
PMCPMC12017169

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.