Evidence map›Paper›PMID 40303095›Full record

ArticleTransboundary and emerging diseases2024

Severe Avian Influenza A H5N1 Clade 2.3.4.4b Virus Infection in a Human with Continuation of SARS-CoV-2 Viral RNAs.

Huiyan Yu, Ke Jin, Songning Ding, Ke Xu, Xian Qi, Junjun Wang, Qigang Dai, Haodi Huang, Chaoqi Xu, Shenjiao Wang and 4 more

Abstract readCase Reports
In one paragraph

Article in Transboundary and emerging diseases, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Huiyan YuDepartment of Acute Infectious Disease Control and Prevention Jiangsu Provincial Center for Disease Control and Prevention NanjingChina.
Ke JinDepartment of Infectious Diseases The First Affiliated Hospital with Nanjing Medical University NanjingChina.
Songning DingNanjing Municipal Center for Disease Control and Prevention NanjingChina.
Ke XuDepartment of Acute Infectious Disease Control and Prevention Jiangsu Provincial Center for Disease Control and Prevention NanjingChina.
Xian QiDepartment of Acute Infectious Disease Control and Prevention Jiangsu Provincial Center for Disease Control and Prevention NanjingChina.
Junjun WangNanjing Municipal Center for Disease Control and Prevention NanjingChina.
Qigang DaiDepartment of Acute Infectious Disease Control and Prevention Jiangsu Provincial Center for Disease Control and Prevention NanjingChina.
Haodi HuangDepartment of Acute Infectious Disease Control and Prevention Jiangsu Provincial Center for Disease Control and Prevention NanjingChina.
Chaoqi XuNanjing Gulou Center for Disease Control and Prevention NanjingChina.
Shenjiao WangDepartment of Acute Infectious Disease Control and Prevention Jiangsu Provincial Center for Disease Control and Prevention NanjingChina.
Fei DengDepartment of Acute Infectious Disease Control and Prevention Jiangsu Provincial Center for Disease Control and Prevention NanjingChina.
Jun LiDepartment of Infectious Diseases The First Affiliated Hospital with Nanjing Medical University NanjingChina.
Liguo ZhuDepartment of Acute Infectious Disease Control and Prevention Jiangsu Provincial Center for Disease Control and Prevention NanjingChina.ORCID https://orcid.org/0000-0002-0636-4089
Changjun BaoDepartment of Acute Infectious Disease Control and Prevention Jiangsu Provincial Center for Disease Control and Prevention NanjingChina.ORCID https://orcid.org/0000-0002-0546-1338

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Since 2020, global attention has heightened towards epidemics caused by avian influenza A H5N1 virus of clade 2.3.4.4b in birds and mammals. This study presents the epidemiological history, clinical manifestations, and prognosis of a unique case infected with avian influenza A H5N1 clade 2.3.4.4b, along with the continuation of SARS-CoV-2 viral RNAs, in Eastern China. Methods: We collected and analysed the patient's clinical, epidemiological, and virological data. Both sputum and bronchoalveolar lavage fluid (BALF) samples were subjected to real-time RT-PCR to test for respiratory pathogens of interests, including SARS-CoV-2 and influenza virus. Influenza virus isolation and propagation were performed on embryonated eggs. Serological tests were used to determine the presence of SARS-CoV-2 antibodies. Phylogenetic analysis was constructed to explore viral evolution and origin of A/H5N1 virus. Results: A 53-year-old female farmer with chronic bronchiectasis was hospitalized with severe pneumonia. Real-time RT-PCR revealed the presence of avian influenza A H5N1 and SARS-CoV-2 in BALF and sputum samples. Sequence analyses classified the human isolate as clade 2.3.4.4b of avian influenza A H5N1. The amino acid motif GlnSerGly at residues 226-228 of the haemagglutinin protein indicated avian-like receptor binding preference. Epidemiological investigation established that the patient had exposure to sick or dead poultry 3 days before illness onset, while no cases of human-to-human H5N1 virus transmission were identified in 31 close contacts. Conclusion: We presented that the clade 2.3.4.4b H5N1 avian influenza virus has the potential to cross-infect humans with serious symptoms, especially in individuals already affected by COVID-19. It is indeed crucial to closely monitor the virus's evolution in both avian populations and humans. Continued research and surveillance efforts are vital to monitor any potential changes in the virus, as well as to inform public health policies and interventions.

Indexed as

COVID-19Influenza A Virus, H5N1 SubtypeInfluenza, HumanSARS-CoV-2AnimalsChinaFemaleHumansInfluenza in BirdsMiddle AgedPhylogenyRNA, ViralRNA, Viral

Identifiers

PMID40303095
PMCPMC12019865

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.