Evidence map›Paper›PMID 40303050›Full record

ArticleTransboundary and emerging diseases2024

Emergence of HPAI H5N6 Clade 2.3.4.4b in Wild Birds: A Case Study From South Korea, 2023.

Chang-Gi Jeong, Chung-Young Lee, Su-Beom Chae, Jung-Hoon Kwon, Eun-Jee Na, Jun-Soo Park, Young-Sik Kim, Seung-Chai Kim, Hwan-Ju Kim, Young-Sun Sung and 3 more

Abstract read
In one paragraph

Article in Transboundary and emerging diseases, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Chang-Gi JeongCollege of Veterinary Medicine, Jeonbuk National University, Iksan 54596, Republic of Korea.ORCID https://orcid.org/0000-0002-0186-9248
Chung-Young LeeDepartment of Microbiology, School of Medicine, Kyungpook National University, 680 Gukchaebosang-ro, Jung-gu, Daegu 41944, Republic of Korea.ORCID https://orcid.org/0000-0003-3037-7581
Su-Beom ChaeCollege of Veterinary Medicine, Jeonbuk National University, Iksan 54596, Republic of Korea.ORCID https://orcid.org/0000-0002-6733-9047
Jung-Hoon KwonCollege of Veterinary Medicine, Kyungpook National University, 80 Daehak-ro, Daegu 41566, Republic of Korea.ORCID https://orcid.org/0000-0002-6737-2242
Eun-Jee NaCollege of Veterinary Medicine, Jeonbuk National University, Iksan 54596, Republic of Korea.ORCID https://orcid.org/0000-0003-1685-3721
Jun-Soo ParkCollege of Veterinary Medicine, Jeonbuk National University, Iksan 54596, Republic of Korea.ORCID https://orcid.org/0000-0002-5808-6594
Young-Sik KimCollege of Veterinary Medicine, Jeonbuk National University, Iksan 54596, Republic of Korea.ORCID https://orcid.org/0000-0002-2448-8202
Seung-Chai KimCollege of Veterinary Medicine, Jeonbuk National University, Iksan 54596, Republic of Korea.ORCID https://orcid.org/0000-0002-1152-2248
Hwan-Ju KimCollege of Veterinary Medicine, Jeonbuk National University, Iksan 54596, Republic of Korea.ORCID https://orcid.org/0000-0001-5524-4908
Young-Sun SungCollege of Veterinary Medicine, Jeonbuk National University, Iksan 54596, Republic of Korea.ORCID https://orcid.org/0009-0008-4345-1668
Sun-Young KimCollege of Veterinary Medicine, Jeonbuk National University, Iksan 54596, Republic of Korea.ORCID https://orcid.org/0009-0007-8751-9866
Won-Il KimCollege of Veterinary Medicine, Jeonbuk National University, Iksan 54596, Republic of Korea.ORCID https://orcid.org/0000-0002-0465-0794
Jae-Ku OemCollege of Veterinary Medicine, Jeonbuk National University, Iksan 54596, Republic of Korea.ORCID https://orcid.org/0000-0002-1598-4343

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The emergence and evolution of avian influenza A viruses (AIVs) pose significant challenges to both public health and animal husbandry worldwide. Here, we characterized a novel reassortant highly pathogenic avian influenza virus (HPAIV), clade 2.3.4.4b H5N6, that was isolated from a mandarin duck in South Korea in December 2023. Phylogenetic and molecular analyses show that the hemagglutinin (HA) gene of the 23-JBN-F12-36/H5N6 virus clustered with HPAIV clade 2.3.4.4b H5N1 viruses, which were circulating in South Korea and Japan in 2022-2023. The M and polymerase acidic (PA) genes also revealed a close association with the HPAIV clade 2.3.4.4b H5N1 AIV that was identified previously in South Korea during November 2022. Notably, the neuraminidase (NA) gene of the 23-JBN-F12-36/H5N6 virus was estimated to have its origins in the HPAIV clade 2.3.4.4h H5N6 prevalent in poultry in China, and it is clustered with the AIVs that are associated with human infection cases. Taken together, these results show that the virus has been produced by reassortment with H5N1 HPAIV, which is prevalent in wild birds; H5N6 HPAIV, which is circulated in poultry in China; and the internal genes of low pathogenic avian influenza viruses (LPAIVs). In light of the reassortment of HPAIVs circulating in existing wild birds and HPAIVs circulating in poultry in China within the 2.3.4.4b H5Nx clade, it is imperative to strengthen active surveillance across wild bird populations, poultry farms, and live poultry markets, and to inform for the effective design of improved prevention and control strategies.

Indexed as

Influenza A virusInfluenza in BirdsAnimalsAnimals, WildBirdsDucksPhylogenyReassortant VirusesRepublic of Korea

Identifiers

PMID40303050
PMCPMC12020246

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.