Evidence map›Paper›PMID 40303032›Full record

ArticleTransboundary and emerging diseases2024

Descriptive Epidemiology and Phylodynamics of the "First Wave" of an Outbreak of Highly Pathogenic Avian Influenza (H5N1 Clade 2.3.4.4b) in British Columbia and the Yukon, Canada, April to September 2022.

Cassandra L Andrew, Shannon L Russell, Michelle Coombe, James E A Zlosnik, Kevin S Kuchinski, Jessica Caleta, Chris Fjell, Yohannes Berhane, Victoria Bowes, Tony Redford and 9 more

Abstract read
In one paragraph

Article in Transboundary and emerging diseases, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Cassandra L Andrew *Department of Medicine, School of Population and Public Health, University of British Columbia, 2206 East Mall Vancouver, B.C. V6T 1Z3, Vancouver, Canada.ORCID https://orcid.org/0000-0002-4925-4867
Shannon L Russell *British Columbia Centre for Disease Control, 655 W 12th Avenue Vancouver, B.C., V5Z 4R4, Vancouver, Canada.
Michelle CoombeDepartment of Medicine, School of Population and Public Health, University of British Columbia, 2206 East Mall Vancouver, B.C. V6T 1Z3, Vancouver, Canada.
James E A ZlosnikBritish Columbia Centre for Disease Control, 655 W 12th Avenue Vancouver, B.C., V5Z 4R4, Vancouver, Canada.ORCID https://orcid.org/0000-0002-9708-9034
Kevin S KuchinskiBritish Columbia Centre for Disease Control, 655 W 12th Avenue Vancouver, B.C., V5Z 4R4, Vancouver, Canada.ORCID https://orcid.org/0000-0001-7588-4910
Jessica CaletaBritish Columbia Centre for Disease Control, 655 W 12th Avenue Vancouver, B.C., V5Z 4R4, Vancouver, Canada.
Chris FjellBritish Columbia Centre for Disease Control, 655 W 12th Avenue Vancouver, B.C., V5Z 4R4, Vancouver, Canada.
Yohannes BerhaneCanadian Food Inspection Agency, National Centre for Foreign Animal Disease, 1015 Arlington Street, Winnipeg MB R3E 3M4, Canada.
Victoria BowesAnimal Health Centre, British Columbia Ministry of Agriculture and Food, 1767 Angus Campbell Road, Abbotsford, B.C. V3G 2M3, Canada.
Tony RedfordAnimal Health Centre, British Columbia Ministry of Agriculture and Food, 1767 Angus Campbell Road, Abbotsford, B.C. V3G 2M3, Canada.
Caeley ThackerBritish Columbia Ministry of Forests, P. O. Box 9338 Stn Prov Govt Victoria, Victoria, B.C., V8W 9M3, Canada.
Laurie WilsonCanadian Wildlife Service, Environment and Climate Change Canada, Pacific Wildlife Research Centre, 5421 Robertson Road, Delta, B.C. V4K 3N2, Canada.ORCID https://orcid.org/0000-0002-1972-1196
Maud HenaffGovernment of Yukon, Department of Environment, Animal Health Unit, 10 Burns Road, Whitehorse YT Y1A 4Y9, Canada.
N Jane HarmsGovernment of Yukon, Department of Environment, Animal Health Unit, 10 Burns Road, Whitehorse YT Y1A 4Y9, Canada.
Agatha JassemBritish Columbia Centre for Disease Control, 655 W 12th Avenue Vancouver, B.C., V5Z 4R4, Vancouver, Canada.
Jolene GiacintiEcotoxicology and Wildlife Health Division, Science and Technology Branch, Environment and Climate Change Canada, 115 Perimeter Road, Saskatoon, SK S7N 0X4, Canada.ORCID https://orcid.org/0000-0002-4843-599X
Catherine SoosEcotoxicology and Wildlife Health Division, Science and Technology Branch, Environment and Climate Change Canada, 115 Perimeter Road, Saskatoon, SK S7N 0X4, Canada.ORCID https://orcid.org/0000-0003-4610-3614
Natalie PrystajeckyBritish Columbia Centre for Disease Control, 655 W 12th Avenue Vancouver, B.C., V5Z 4R4, Vancouver, Canada.
Chelsea HimsworthDepartment of Medicine, School of Population and Public Health, University of British Columbia, 2206 East Mall Vancouver, B.C. V6T 1Z3, Vancouver, Canada.ORCID https://orcid.org/0000-0002-8081-9555

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Highly pathogenic avian influenza (HPAI) is a viral disease that causes significant rates of morbidity and mortality in domestic poultry and wild birds, with occasional spillover into mammals, including humans. Beginning in November 2021, Canada experienced its longest and largest outbreak of HPAI in history. A portion of this outbreak (H5N1, clade 2.3.4.4b) occurred in western Canada, specifically in British Columbia (B.C.) and the Yukon, between April 12 and September 11, 2022, which was classified as the "first wave" in this region. Wild birds and mammals identified through passive surveillance and suspect domestic poultry flocks were screened for avian influenza virus (AIV), typed H5 by qPCR, and positive cases were whole genome sequenced. Descriptive epidemiological and phylodynamic analyses were performed to: (1) understand the taxonomic and geographic extent of wild species involved; and (2) examine the origins and probable transmission networks of HPAI viruses introduced into B.C./Yukon by comparing local viruses with those circulating elsewhere in North America. This outbreak included 21 species of wild birds, 2 species of wild mammals, 4 commercial, and 12 domestic small flock infected premises. Canada geese (

Indexed as

Disease OutbreaksInfluenza A Virus, H5N1 SubtypeInfluenza in BirdsAnimalsAnimals, WildBirdsBritish ColumbiaCanadaPhylogenyPoultryPoultry Diseases

Identifiers

PMID40303032
PMCPMC12017231

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.