Evidence map›Paper›PMID 40301344›Full record

ArticleNature communications2025

Global diversity and distribution of antibiotic resistance genes in human wastewater treatment systems.

Congmin Zhu, Linwei Wu, Daliang Ning, Renmao Tian, Shuhong Gao, Bing Zhang, Jianshu Zhao, Ya Zhang, Naijia Xiao, Yajiao Wang and 23 more

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

33 authors.

Congmin Zhu *School of Biomedical Engineering, Capital Medical University, Beijing, China.ORCID http://orcid.org/0000-0002-0472-9128
Linwei Wu *Institute for Environmental Genomics, University of Oklahoma, Norman, OK, USA. linwei.wu@pku.edu.cn.ORCID http://orcid.org/0000-0002-6649-5072
Daliang Ning *Institute for Environmental Genomics, University of Oklahoma, Norman, OK, USA.ORCID http://orcid.org/0000-0002-3368-5988
Renmao TianInstitute for Environmental Genomics, University of Oklahoma, Norman, OK, USA.
Shuhong GaoInstitute for Environmental Genomics, University of Oklahoma, Norman, OK, USA.
Bing ZhangState Key Joint Laboratory of Environment Simulation and Pollution Control, School of Environment, Tsinghua University, Beijing, China.
Jianshu ZhaoCenter for Bioinformatics and Computational Biology, School of Biological Sciences, Georgia Institute of Technology, Atlanta, GA, USA.ORCID http://orcid.org/0000-0002-2586-3852
Ya ZhangInstitute for Environmental Genomics, University of Oklahoma, Norman, OK, USA.ORCID http://orcid.org/0000-0002-1746-3437
Naijia XiaoInstitute for Environmental Genomics, University of Oklahoma, Norman, OK, USA.
Yajiao WangInstitute for Environmental Genomics, University of Oklahoma, Norman, OK, USA.
Mathew R BrownSchool of Engineering, Newcastle University, Newcastle upon Tyne, UK.ORCID http://orcid.org/0000-0002-0627-3937
Qichao TuInstitute for Marine Science and Technology, Shandong University, Qingdao, China.
Global Water Microbiome Consortium
Feng JuKey Laboratory of Coastal Environment and Resources of Zhejiang Province, School of Engineering, Westlake University, Hangzhou, Zhejiang, China.ORCID http://orcid.org/0000-0003-4137-5928
George F WellsDepartment of Civil and Environmental Engineering, Northwestern University, Evanston, IL, USA.ORCID http://orcid.org/0000-0002-9100-1628
Jianhua GuoAustralian Centre for Water and Environmental Biotechnology, The University of Queensland, Brisbane, Queensland, Australia.ORCID http://orcid.org/0000-0002-4732-9175
Zhili HeSouthern Marine Science and Engineering Guangdong Laboratory, Zhuhai, China.ORCID http://orcid.org/0000-0001-8225-7333
Per H NielsenDepartment of Chemistry and Bioscience, Center for Microbial Communities, Aalborg University, Aalborg, Denmark.ORCID http://orcid.org/0000-0002-6402-1877
Aijie WangResearch Center for Eco-Environmental Sciences, Chinese Academy of Sciences, Beijing, China.
Yu ZhangState Key Laboratory of Environmental Aquatic Chemistry, Research Center for Eco-Environmental Sciences, University of Chinese Academy of Sciences, Chinese Academy of Sciences, Beijing, China.ORCID http://orcid.org/0000-0003-1017-4170
Ting ChenInstitute for Artificial Intelligence and Department of Computer Science and Technology, Tsinghua University, Beijing, China.ORCID http://orcid.org/0000-0002-3228-9166
Qiang HeDepartment of Civil and Environmental Engineering, The University of Tennessee, Knoxville, TN, USA.ORCID http://orcid.org/0000-0002-7155-6474
Craig S CriddleDepartment of Civil and Environmental Engineering, Stanford University, Stanford, CA, USA.
Michael WagnerDepartment of Microbiology and Ecosystem Science, Division of Microbial Ecology, Research Network 'Chemistry meets Microbiology', University of Vienna, Vienna, Austria.
James M TiedjeCenter for Microbial Ecology, Michigan State University, East Lansing, MI, USA.ORCID http://orcid.org/0000-0002-8992-6218
Thomas P CurtisSchool of Engineering, Newcastle University, Newcastle upon Tyne, UK.ORCID http://orcid.org/0000-0002-9009-1748
Xianghua WenState Key Joint Laboratory of Environment Simulation and Pollution Control, School of Environment, Tsinghua University, Beijing, China.ORCID http://orcid.org/0000-0002-9792-8678
Yunfeng YangState Key Joint Laboratory of Environment Simulation and Pollution Control, School of Environment, Tsinghua University, Beijing, China.ORCID http://orcid.org/0000-0001-8274-6196
Lisa Alvarez-CohenDepartment of Civil and Environmental Engineering, College of Engineering, University of California, Berkeley, CA, USA.
David A StahlDepartment of Civil and Environmental Engineering, University of Washington, Seattle, WA, USA.
Pedro J J AlvarezDepartment of Civil and Environmental Engineering, Rice University, Houston, TX, USA.ORCID http://orcid.org/0000-0002-6725-7199
Bruce E RittmannBiodesign Swette Center for Environmental Biotechnology, Arizona State University, Tempe, AZ, USA.ORCID http://orcid.org/0000-0002-3678-149X
Jizhong ZhouInstitute for Environmental Genomics, University of Oklahoma, Norman, OK, USA. jzhou@ou.edu.ORCID http://orcid.org/0000-0003-2014-0564

Funding

National Natural Science Foundation of China (National Science Foundation of China) 32371724National Natural Science Foundation of China (National Science Foundation of China) 61872218National Natural Science Foundation of China (National Science Foundation of China) 82202299National Science Foundation (NSF) EF-2025558
6 · The paper itself

Abstract

Antibiotic resistance poses a significant threat to human health, and wastewater treatment plants (WWTPs) are important reservoirs of antibiotic resistance genes (ARGs). Here, we analyze the antibiotic resistomes of 226 activated sludge samples from 142 WWTPs across six continents, using a consistent pipeline for sample collection, DNA sequencing and analysis. We find that ARGs are diverse and similarly abundant, with a core set of 20 ARGs present in all WWTPs. ARG composition differs across continents and is distinct from that of the human gut and the oceans. ARG composition strongly correlates with bacterial taxonomic composition, with Chloroflexi, Acidobacteria and Deltaproteobacteria being the major carriers. ARG abundance positively correlates with the presence of mobile genetic elements, and 57% of the 1112 recovered high-quality genomes possess putatively mobile ARGs. Resistome variations appear to be driven by a complex combination of stochastic processes and deterministic abiotic factors.

Indexed as

BacteriaDrug Resistance, BacterialDrug Resistance, MicrobialGenes, BacterialWastewaterAnti-Bacterial AgentsHumansInterspersed Repetitive SequencesSewageWater PurificationAnti-Bacterial AgentsSewageWastewater

Identifiers

PMID40301344
PMCPMC12041579

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.