Evidence map›Paper›PMID 40299171›Full record

ArticleArchives of virology2025

Molecular detection and genotyping of bovine viral diarrhea virus in four provinces of China.

Ying Liu, Feng Zhou, Xuan-Ang Wang, Xi-Meng Chen, Lan-Lan Zheng, Hong-Ying Chen, Shi-Jie Ma

Abstract read
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In one paragraph

Article in Archives of virology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Ying Liu *Ministry of Education Key Laboratory for Animal Pathogens and Biosafety, College of Veterinary Medicine, Henan Agricultural University, Zhengdong New District Longzi Lake #15, Zhengzhou, Henan Province, 450046, P.R. China.
Feng Zhou *Henan Seed Industry Development Center, Zhengzhou, Henan Province, 450000, P.R. China.
Xuan-Ang Wang *Ministry of Education Key Laboratory for Animal Pathogens and Biosafety, College of Veterinary Medicine, Henan Agricultural University, Zhengdong New District Longzi Lake #15, Zhengzhou, Henan Province, 450046, P.R. China.
Xi-Meng ChenMinistry of Education Key Laboratory for Animal Pathogens and Biosafety, College of Veterinary Medicine, Henan Agricultural University, Zhengdong New District Longzi Lake #15, Zhengzhou, Henan Province, 450046, P.R. China.
Lan-Lan ZhengMinistry of Education Key Laboratory for Animal Pathogens and Biosafety, College of Veterinary Medicine, Henan Agricultural University, Zhengdong New District Longzi Lake #15, Zhengzhou, Henan Province, 450046, P.R. China.
Hong-Ying ChenMinistry of Education Key Laboratory for Animal Pathogens and Biosafety, College of Veterinary Medicine, Henan Agricultural University, Zhengdong New District Longzi Lake #15, Zhengzhou, Henan Province, 450046, P.R. China. chhy927@163.com.ORCID http://orcid.org/0000-0002-8245-3999
Shi-Jie MaMinistry of Education Key Laboratory for Animal Pathogens and Biosafety, College of Veterinary Medicine, Henan Agricultural University, Zhengdong New District Longzi Lake #15, Zhengzhou, Henan Province, 450046, P.R. China. participate2006@126.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bovine viral diarrhea virus (BVDV) is one of the major pathogens hindering the development of the global beef industry. To investigate the epidemic profile and genetic diversity of this virus, a total of 77 fecal samples were collected from cattle with diarrhea in Henan, Sichuan, Shandong, and Hebei provinces of China during 2023-2024 and screened for the presence of BVDV using reverse transcription polymerase chain reaction (RT-PCR). The results showed that 35 of the 77 bovine samples (45%) were positive for BVDV, with the highest positive rate of 26% (20/77) in Henan province. The 5'-UTR sequences of the viruses from 21 positive samples and the whole-genome sequence from one sample (BVDV-385) were determined and analyzed. The 5'-UTR sequences from this study were 74.7-96.4% identical to those of 23 reference sequences. Phylogenetic analysis based on the 5'-UTR sequences indicated that 20 of the strains belonged to the subtype BVDV-1m, while only one, BVDV-385 from Henan province, belonged to genotype BVDV-3. Analysis of the genome sequence of strain BVDV-385 showed that its E2 protein has a unique amino acid (aa) deletion and ten unique aa substitutions, and its NS5B protein has seven unique aa substitutions. The variations were predicted to affect four potential linear B cell epitopes in the E2 protein and to introduce a potential non-canonical N-glycosylation site (574 NPS) in the NS5B protein. The results of this study contribute to our understanding of the genetic diversity of BVDV in China.

Indexed as

Bovine Virus Diarrhea-Mucosal DiseaseDiarrhea Viruses, Bovine Viral5' Untranslated RegionsAnimalsCattleChinaFecesGenetic VariationGenome, ViralGenotypePhylogenyRNA, Viral5' Untranslated RegionsRNA, Viral

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.