Evidence map›Paper›PMID 40296094›Full record

ArticleRespiratory research2025

Dysregulated metabolic pathways of pulmonary fibrosis and the lipids associated with the effects of nintedanib therapy.

Yasuo Shimizu, Yasuhiro Horibata, Mariko Domae, Yusuke Nakamura, Tatsuya Yokoyama, Ryo Arai, Taichi Shiobara, Akihiro Takemasa, Ryosuke Koike, Nobuhiko Uchida and 9 more

Abstract read
In one paragraph

Article in Respiratory research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Yasuo ShimizuDepartment of Pulmonary Medicine and Clinical Immunology, Dokkyo Medical University, Mibu, Tochigi, 321-0293, Japan. yasuo-s@dokkyomed.ac.jp.
Yasuhiro HoribataDepartment of Biochemistry, Mibu, Tochigi, 321-0293, Japan.
Mariko DomaeDepartment of Biochemistry, Mibu, Tochigi, 321-0293, Japan.
Yusuke NakamuraDepartment of Pulmonary Medicine and Clinical Immunology, Dokkyo Medical University, Mibu, Tochigi, 321-0293, Japan.
Tatsuya YokoyamaDepartment of Pulmonary Medicine and Clinical Immunology, Dokkyo Medical University, Mibu, Tochigi, 321-0293, Japan.
Ryo AraiDepartment of Pulmonary Medicine and Clinical Immunology, Dokkyo Medical University, Mibu, Tochigi, 321-0293, Japan.
Taichi ShiobaraDepartment of Pulmonary Medicine and Clinical Immunology, Dokkyo Medical University, Mibu, Tochigi, 321-0293, Japan.
Akihiro TakemasaDepartment of Pulmonary Medicine and Clinical Immunology, Dokkyo Medical University, Mibu, Tochigi, 321-0293, Japan.
Ryosuke KoikeDepartment of Pulmonary Medicine and Clinical Immunology, Dokkyo Medical University, Mibu, Tochigi, 321-0293, Japan.
Nobuhiko UchidaDepartment of Pulmonary Medicine and Clinical Immunology, Dokkyo Medical University, Mibu, Tochigi, 321-0293, Japan.
Meitetsu MasawaDepartment of Pulmonary Medicine and Clinical Immunology, Dokkyo Medical University, Mibu, Tochigi, 321-0293, Japan.
Rinna TeiDepartment of Pulmonary Medicine and Clinical Immunology, Dokkyo Medical University, Mibu, Tochigi, 321-0293, Japan.
Taiji WatanabeDepartment of Pulmonary Medicine and Clinical Immunology, Dokkyo Medical University, Mibu, Tochigi, 321-0293, Japan.
Hiroko MoritaDepartment of Pulmonary Medicine and Clinical Immunology, Dokkyo Medical University, Mibu, Tochigi, 321-0293, Japan.
Masaaki MiyoshiDepartment of Pulmonary Medicine and Clinical Immunology, Dokkyo Medical University, Mibu, Tochigi, 321-0293, Japan.
Sayo SodaDepartment of Pulmonary Medicine and Clinical Immunology, Dokkyo Medical University, Mibu, Tochigi, 321-0293, Japan.
Seiji NihoDepartment of Pulmonary Medicine and Clinical Immunology, Dokkyo Medical University, Mibu, Tochigi, 321-0293, Japan.
Ko IgamiKyushu Pro Search Limited Liability Partnership, 4-1, Kyudaishinmachi, Nishi-ku, Fukuoka, 819-0388, Japan.
Hiroyuki SugimotoDepartment of Biochemistry, Mibu, Tochigi, 321-0293, Japan.

Funding

Boehringer Ingelheim JP Science Research Promotion Fund 2023 none
6 · The paper itself

Abstract

backgroundPulmonary fibrosis (PF) is a disease with a poor prognosis, and its pathogenesis is not fully understood. Identifying dysregulation of lipid metabolism in PF may provide insight and promote the development of novel therapies. The present study was designed to clarify the dysregulated lipid pathways and identify lipids correlated with treatment response.

methodsThis research comprised two prospective cohort studies. Study 1 aimed to identify dysregulated metabolic pathways and lipids in the peripheral blood of PF patients, compared with healthy control (HC) subjects. Study 2 aimed to identify lipids associated with the decline in % forced vital capacity (%FVC) and survival in PF patients treated with the anti-fibrotic drug, nintedanib. As a preliminary ancillary experiment, we attempted to identify the lipids associated with endothelial cells and fibroblasts.

resultsIn Study 1, 38 lipids were identified that differed between the PF (n = 66) and HC (n = 63) groups. Compared with the HC subjects, phosphatidylcholine (PC) 36:5 was the most up-regulated and lysophosphatidylcholine (LPC) 18:0 was the most down-regulated in PF patients. Glycerophospholipid metabolism was the most enriched pathway. Plasmenyl phosphatidylethanolamine (pPE) and plasmanyl phosphatidylcholine (pPC) were determined to be endothelial-related lipids, and phosphatidylethanolamine (PE) were fibroblast-related lipids in PF. In Study 2, 10 lipids were identified that differed between the absolute decline in %FVC < 2.5% group (6 M responders, n = 14) and the decline in %FVC > 2.5% group (6 M non-responders, n = 6) after 6 M of nintedanib therapy, and 6 lipids were identified that differed between the absolute decline in %FVC < 5% group (12 M responders, n = 15) and the decline in %FVC > 5% group (12 M non-responders, n = 5) after 12 M of nintedanib therapy. Four lipids were consistently detected at 6 M and 12 M, and among them, higher levels of pPE 18:0p/22:6 at 6 M showed a poorer prognosis for 24 M survival (p < 0.05, HR = 6.547, 95% CI = 1.471-29.13). Under nintedanib therapy, pPE species were correlated with progressive fibrosis, and pPE 18:0p/22:6 was considered an endothelial-related lipid.

conclusionsLipidomic profiling revealed distinct pathways in PF patients. pPE species were strongly associated with the responses to nintedanib therapy. Targeting the lipids or catabolic enzymes involved in dysregulated pathways has the potential to ameliorate PF.

trial registrationRegistry for UMIN, Lipidomic analysis on plasma in idiopathic pulmonary fibrosis patients. Trial registry number, UMIN000020872. Registered 3 February 2016, https://center6.umin.ac.jp/cgiopenbin/ctr/index.cgi .

Indexed as

IndolesLipid MetabolismLipidsMetabolic Networks and PathwaysPulmonary FibrosisAgedCohort StudiesFemaleHumansMaleMiddle AgedProspective StudiesProtein Kinase InhibitorsTreatment OutcomeIndolesLipidsnintedanibProtein Kinase InhibitorsEndothelial cellsLC-MSLipidomicsMetabolic dysregulationMyofibroblastsNintedanibPlasmalogenPlasmenyl phosphatidylethanolaminePulmonary fibrosisVasculature

Identifiers

PMID40296094
PMCPMC12038997

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.