Evidence map›Paper›PMID 40295885›Full record

ArticleNpj viruses2024

Detection of divergent Orthohantavirus tulaense provides insight into wide host range and viral evolutionary patterns.

Mert Erdin, Teemu Smura, Kursat Kenan Kalkan, Ortac Cetintas, Muhsin Cogal, Sercan Irmak, Ferhat Matur, Ceylan Polat, Tarja Sironen, Mustafa Sozen and 1 more

Abstract read
In one paragraph

Article in Npj viruses, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Mert ErdinDepartment of Virology, Medicum, Faculty of Medicine, University of Helsinki, Helsinki, Finland. mert.erdin@helsinki.fi.
Teemu SmuraDepartment of Virology, Medicum, Faculty of Medicine, University of Helsinki, Helsinki, Finland.
Kursat Kenan KalkanDepartment of Biology, Faculty of Science, Zonguldak Bulent Ecevit University, Zonguldak, Türkiye.
Ortac CetintasDepartment of Biology, Faculty of Science, Zonguldak Bulent Ecevit University, Zonguldak, Türkiye.
Muhsin CogalDepartment of Biology, Faculty of Science, Zonguldak Bulent Ecevit University, Zonguldak, Türkiye.
Sercan IrmakScience and Technology Application and Research Center, Balikesir University, Balikesir, Türkiye.
Ferhat MaturDepartment of Biology, Faculty of Science, Dokuz Eylul University, Izmir, Türkiye.
Ceylan PolatVirology Unit, Department of Medical Microbiology, Faculty of Medicine, Hacettepe University, Ankara, Türkiye.
Tarja SironenDepartment of Virology, Medicum, Faculty of Medicine, University of Helsinki, Helsinki, Finland.
Mustafa SozenDepartment of Biology, Faculty of Science, Zonguldak Bulent Ecevit University, Zonguldak, Türkiye.
Ibrahim Mehmet Ali OktemDepartment of Medical Microbiology, Faculty of Medicine, Dokuz Eylul University, Izmir, Türkiye. ali.oktem@deu.edu.tr.

Funding

Research Council of Finland 339510Türkiye Bilimsel ve Teknolojik Araştırma Kurumu 118S681
6 · The paper itself

Abstract

Orthohantavirus tulaense (TULV) is a member of the orthohantavirus genus and distributed in Europe and Asia. To shed light on TULV epidemiology and evolution, we trapped wild rodents from eastern Turkiye and found 15 TULV positive rodents. Sequencing and phylogenetic analyses confirmed the presence of diverse TULV strains. Global phylogenetic characterization suggested 5 distinct TULV lineages. Global phylogeographic reconstruction estimated different rooting times for each three segments, a potential ancestor location in Eastern Black Sea region, and strongly supported phylogeographic structure with 11 clusters. Dispersal velocity of TULV was estimated to be much faster than some other orthohantaviruses. Eastern Black Sea seemed to have lineages evolving faster and genetically closer to proto-Tula virus. Host switching estimates suggested potential switching events from Microtus arvalis to M. obscurus to M. irani with host-dependent sub-clustering within geographic clusters and suggested substantial evidence for no clear virus jumps from M. arvalis to M. irani.

Identifiers

PMID40295885
PMCPMC11721384

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.