Evidence map›Paper›PMID 40295877›Full record

ArticleNature metabolism2025

Intracellular metabolic gradients dictate dependence on exogenous pyruvate.

Benjamin T Jackson, Angela M Montero, Sangita Chakraborty, Julia S Brunner, Paige K Arnold, Anna E Bridgeman, Pavlina K Todorova, Katrina I Paras, Lydia W S Finley

Abstract read
In one paragraph

Article in Nature metabolism, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Benjamin T Jackson *Cell Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY, USA.ORCID http://orcid.org/0000-0003-1089-4362
Angela M Montero *Cell Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
Sangita ChakrabortyCell Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
Julia S BrunnerCell Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
Paige K ArnoldCell Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
Anna E BridgemanCell Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY, USA.ORCID http://orcid.org/0009-0000-5505-985X
Pavlina K TodorovaCell Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
Katrina I ParasCell Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY, USA.ORCID http://orcid.org/0000-0001-9743-5710
Lydia W S FinleyCell Biology Program, Memorial Sloan Kettering Cancer Center, New York, NY, USA. finleyl@mskcc.org.ORCID http://orcid.org/0000-0003-4023-7574

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
Weill Cornell/Rockefeller/Sloan Kettering MST ProgramT32GM152349 · NIGMS · WEILL MEDICAL COLL OF CORNELL UNIV · PI KATHARINE C HSU · 2024 to 2026
$6.6M
Training Program in Developmental BiologyT32HD060600 · NICHD · WEILL MEDICAL COLL OF CORNELL UNIV · PI BAO, ZHIRONG, STUHLMANN, HEIDI · 2010 to 2024
$3.5M
Metabolic control of exit from naïve pluripotencyF30HD107943 · NICHD · WEILL MEDICAL COLL OF CORNELL UNIV · PI JACKSON, BENJAMIN TONNU · 2022 to 2025
$184k
Coupling metabolic pathways with pluripotent gene regulation in mouse embryonic stem cellsF31HD098824 · NICHD · SLOAN-KETTERING INST CAN RESEARCH · PI ARNOLD, PAIGE · 2019 to 2021
$137k
Human Frontier Science Program (HFSP) LT000200/2021-LNCI NIH HHS P30 CA008748NICHD NIH HHS F30 HD107943NICHD NIH HHS F31 HD098824NICHD NIH HHS T32 HD060600NIGMS NIH HHS T32 GM152349U.S. Department of Health & Human Services | NIH | Eunice Kennedy Shriver National Institute of Child Health and Human Development (NICHD) F30HD107943U.S. Department of Health & Human Services | NIH | Eunice Kennedy Shriver National Institute of Child Health and Human Development (NICHD) F31HD098824U.S. Department of Health & Human Services | NIH | Eunice Kennedy Shriver National Institute of Child Health and Human Development (NICHD) T32HD060600U.S. Department of Health & Human Services | NIH | National Cancer Institute (NCI) P30CA008748U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) T32GM152349
6 · The paper itself

Abstract

During developmental transitions, cells frequently remodel metabolic networks, including changing reliance on metabolites such as glucose and glutamine to fuel intracellular metabolic pathways. Here we used embryonic stem (ES) cells as a model system to understand how changes in intracellular metabolic networks that characterize cell state transitions affect reliance on exogenous nutrients. We find that ES cells in the naive ground state of pluripotency increase uptake and reliance on exogenous pyruvate through the monocarboxylate transporter MCT1. Naive ES cells, but not their more committed counterparts, rely on exogenous pyruvate even when other sources of pyruvate (glucose, lactate) are abundant. Pyruvate dependence in naive ES cells is a consequence of their elevated mitochondrial pyruvate consumption at the expense of cytosolic NAD

Indexed as

Embryonic Stem CellsPyruvic AcidAnimalsCytosolGlucoseMetabolic Networks and PathwaysMiceMitochondriaMonocarboxylate Transport Protein 1Monocarboxylic Acid TransportersNADSymportersGlucoseMonocarboxylate Transport Protein 1Monocarboxylic Acid TransportersNADPyruvic AcidSymporters

Identifiers

PMID40295877
PMCPMC12197826

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.