Evidence map›Paper›PMID 40295640›Full record

ArticleNpj viruses2023

Survey of white-footed mice (Peromyscus leucopus) in Connecticut, USA reveals low SARS-CoV-2 seroprevalence and infection with divergent betacoronaviruses.

Rebecca Earnest, Anne M Hahn, Nicole M Feriancek, Matthew Brandt, Renata B Filler, Zhe Zhao, Mallery I Breban, Chantal B F Vogels, Nicholas F G Chen, Robert T Koch and 14 more

Abstract read
In one paragraph

Article in Npj viruses, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. SARS-CoV-2 virus infection ofbioRxiv : the preprint server for biology · 2026
    Article
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

24 authors.

Rebecca Earnest *Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT, 06510, USA. earnest.rebecca@gmail.com.
Anne M Hahn *Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT, 06510, USA.
Nicole M FeriancekDepartment of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT, 06510, USA.
Matthew BrandtDepartment of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT, 06510, USA.
Renata B FillerDepartment of Laboratory Medicine, Yale School of Medicine, New Haven, CT, 06520, USA.
Zhe ZhaoDepartment of Laboratory Medicine, Yale School of Medicine, New Haven, CT, 06520, USA.
Mallery I BrebanDepartment of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT, 06510, USA.
Chantal B F VogelsDepartment of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT, 06510, USA.
Nicholas F G ChenDepartment of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT, 06510, USA.
Robert T KochDepartment of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT, 06510, USA.
Abbey J PorzucekDepartment of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT, 06510, USA.
Afeez SodeindeDepartment of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT, 06510, USA.
Alexa GarbielDepartment of Environmental Science and Forestry, The Connecticut Agricultural Experiment Station, New Haven, CT, 06511, USA.
Claire KeannaDepartment of Environmental Science and Forestry, The Connecticut Agricultural Experiment Station, New Haven, CT, 06511, USA.
Hannah LitwakDepartment of Environmental Science and Forestry, The Connecticut Agricultural Experiment Station, New Haven, CT, 06511, USA.
Heidi R StuberDepartment of Entomology, The Connecticut Agricultural Experiment Station, New Haven, CT, 06511, USA.
Jamie L CantoniDepartment of Entomology, The Connecticut Agricultural Experiment Station, New Haven, CT, 06511, USA.
Virginia E PitzerDepartment of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT, 06510, USA.
Ximena A Olarte CastilloDepartment of Microbiology and Immunology, Cornell University College of Veterinary Medicine, Ithaca, NY, 14853, USA.
Laura B GoodmanDepartment of Public & Ecosystem Health, Cornell University College of Veterinary Medicine, Ithaca, NY, 14853, USA.
Craig B WilenDepartment of Laboratory Medicine, Yale School of Medicine, New Haven, CT, 06520, USA.
Megan A LinskeDepartment of Entomology, The Connecticut Agricultural Experiment Station, New Haven, CT, 06511, USA.
Scott C WilliamsDepartment of Environmental Science and Forestry, The Connecticut Agricultural Experiment Station, New Haven, CT, 06511, USA.
Nathan D GrubaughDepartment of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT, 06510, USA.

Funding

NRSA Training CoreTL1TR001864 · NCATS · YALE UNIVERSITY · PI CANTLEY, LLOYD G, EDELMAN, E. JENNIFER · 2016 to 2025
$9.9M
NCATS NIH HHS TL1 TR001864
6 · The paper itself

Abstract

Diverse mammalian species display susceptibility to SARS-CoV-2. Potential SARS-CoV-2 spillback into rodents is understudied despite their host role for numerous zoonoses and human proximity. We assessed exposure and infection among white-footed mice (Peromyscus leucopus) in Connecticut, USA. We observed 1% (6/540) wild-type neutralizing antibody seroprevalence among 2020-2022 residential mice with no cross-neutralization of variants. We detected no SARS-CoV-2 infections via RT-qPCR, but identified non-SARS-CoV-2 betacoronavirus infections via pan-coronavirus PCR among 1% (5/468) of residential mice. Sequencing revealed two divergent betacoronaviruses, preliminarily named Peromyscus coronavirus-1 and -2. Both belong to the Betacoronavirus 1 species and are ~90% identical to the closest known relative, Porcine hemagglutinating encephalomyelitis virus. In addition, to provide a comparison, we also screened a species with significant SARS-CoV-2 infection and exposure across North America: the white-tailed deer (Odocoileus virginianus). We detected no active coronavirus infections and 7% (4/55) wild-type SARS-CoV-2 neutralizing antibody seroprevalence. Low SARS-CoV-2 seroprevalence suggests white-footed mice may not be sufficiently susceptible or exposed to SARS-CoV-2 to present a long-term human health risk. However, the discovery of divergent, non-SARS-CoV-2 betacoronaviruses expands the diversity of known rodent coronaviruses and further investigation is required to understand their transmission extent.

Identifiers

PMID40295640
PMCPMC11721133

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.