Evidence map›Paper›PMID 40292191›Full record

ArticleMethodsX2025

Deep recurrent neural network with fractional addax optimization algorithm for influenza virus host prediction.

Shweta Ashish Koparde, Sonali Kothari, Sharad Adsure, Kapil Netaji Vhatkar, Vinod V Kimbahune

Abstract read
In one paragraph

Article in MethodsX, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

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No citing paper in PubMed yet.

4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Shweta Ashish KopardeDepartment of Computer Engineering, Dr. D. Y. Patil Institute of Technology, Pimpri, Pune, India.
Sonali KothariSymbiosis Institute of Technology - Pune Campus, Symbiosis International (Deemed University), Pune, India.
Sharad AdsureDepartment of Computer Engineering, Dr. D. Y. Patil Institute of Technology, Pimpri, Pune, India.
Kapil Netaji VhatkarDepartment of Computer Engineering, Dr. D. Y. Patil Institute of Technology, Pimpri, Pune, India.
Vinod V KimbahuneDepartment of Computer Engineering, Dr. D. Y. Patil Institute of Technology, Pimpri, Pune, India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The accurate prediction of the host of influenza viruses is a significant challenge in bioinformatics, as it is crucial for understanding viral transmission dynamics and host-virus interactions. This research•Introduces a novel approach for predicting the host of influenza viruses by leveraging protein sequences.•Extraction of features, including sequence length, Amino Acid Composition (AAC), Dipeptide Composition (DPC), Tripeptide Composition (TPC), aromaticity, secondary structure fraction, and entropy from protein sequence.•Addresses the data imbalance and improves model generalization, the oversampling technique is applied for data augmentation. The prediction model employs a Deep Recurrent Neural Network (DRNN) optimized by Fractional Addax Optimization 34 Algorithm (FAOA), a hybrid of Addax Optimization Algorithm (AOA) and Fractional Concept (FC), designed to perform 35 influenza virus host prediction. The model's performance is evaluated using metrics, such as Matthews's Correlation 36 Coefficient (MCC), F1-Score, and Mean Squared Error (MSE). Experimental results demonstrate that the DRNN_FAOA 37 model significantly outperforms existing methods, achieving the highest MCC of 0.937, F1-Score of 0.917, and the 38 lowest MSE of 0.038. The proposed DRNN_FAOA model's ability to accurately predict influenza virus hosts suggests its 39 potential as a robust model in virus-host prediction.

Indexed as

Deep learningFractional Addax Optimization AlgorithmHost predictionInfluenza virusOptimizationProtein sequence

Identifiers

PMID40292191
PMCPMC12033955

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.