Evidence map›Paper›PMID 40289066›Full record

ReviewWorld journal of microbiology & biotechnology2025

How genomics can help unravel the evolution of endophytic fungi.

Jefferson Brendon Almeida Dos Reis, Andrei Stecca Steindorff, Adriana Sturion Lorenzi, Danilo Batista Pinho, Helson Mario Martins do Vale, Georgios Joannis Pappas

Abstract readReview
PubMed Publisher
In one paragraph

Review in World journal of microbiology & biotechnology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Jefferson Brendon Almeida Dos ReisDepartment of Phytopathology, University of Brasília (UnB), Institute of Biological Sciences, Brasília, DF, Brazil. jeffersonalmeidareis@gmail.com.
Andrei Stecca SteindorffUS DOE Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.
Adriana Sturion LorenziDepartment of Cellular Biology, University of Brasília (UnB), Institute of Biological Sciences, Brasília, DF, Brazil.
Danilo Batista PinhoDepartment of Phytopathology, University of Brasília (UnB), Institute of Biological Sciences, Brasília, DF, Brazil.
Helson Mario Martins do ValeDepartment of Phytopathology, University of Brasília (UnB), Institute of Biological Sciences, Brasília, DF, Brazil.
Georgios Joannis PappasDepartment of Cellular Biology, University of Brasília (UnB), Institute of Biological Sciences, Brasília, DF, Brazil.

Funding

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior-Brasil (CAPES) Funding code 001Fundação de Amparo à Pesquisa e Inovação do Estado de Santa Catarina FAPESC N.º: 1580/2024Office of Science of the U.S. Department of Energy No. DE-AC02-05CH11231
6 · The paper itself

Abstract

Endophytic fungi (EFs) form intimate associations with plants, residing within their tissues without causing apparent harm. Understanding the evolution of endophytic fungal genomes is essential for uncovering the mechanisms that drive their symbiotic relationships with host plants. This review explores the dynamic interactions between EFs and host plants, focusing on the evolutionary processes that shape their genomes. We highlighted key genomic adaptations promoting their endophytic lifestyle, including genes involved in plant cell wall degradation, secondary metabolite production, and stress tolerance. By combining genomic data with ecological and physiological information, this review provides a comprehensive understanding of the coevolutionary dynamics between EFs and host plants. Moreover, it provides insights that help elucidate the complex interdependencies governing their symbiotic interactions.

Indexed as

EndophytesEvolution, MolecularFungiGenome, FungalGenomicsPlantsBiological EvolutionSecondary MetabolismSymbiosisCo-evolutionEcological interactionsEndophytic lifestyleGenomic adaptationsPan-genomics

Identifiers

PMID40289066

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.