Evidence map›Paper›PMID 40287458›Full record

ArticleScientific reports2025

A novel mathematical framework for pedigree-based calculation of Y-STR match probabilities.

Amke Caliebe, Dion Zandstra, Arwin Ralf, Manfred Kayser, Michael Krawczak

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Forensic genetics in the omics era.Nature reviews. Genetics · 2026
    Review
4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Amke CaliebeInstitute of Medical Informatics and Statistics, Kiel University, University Hospital Schleswig-Holstein, Brunswiker Straße 10, 24105, Kiel, Germany. caliebe@medinfo.uni-kiel.de.
Dion ZandstraDepartment of Genetic Identification, Erasmus MC University Medical Center Rotterdam, Rotterdam, The Netherlands.
Arwin RalfDepartment of Genetic Identification, Erasmus MC University Medical Center Rotterdam, Rotterdam, The Netherlands.
Manfred KayserDepartment of Genetic Identification, Erasmus MC University Medical Center Rotterdam, Rotterdam, The Netherlands.
Michael KrawczakInstitute of Medical Informatics and Statistics, Kiel University, University Hospital Schleswig-Holstein, Brunswiker Straße 10, 24105, Kiel, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Y-chromosomal short tandem repeat (Y-STR) markers are routinely used in forensic casework to identify male donors of biological traces left at crime scenes, particularly in sexual assault cases. However, the evidential value of a match between the Y-STR profile of a trace and a potential donor, usually a crime suspect, is difficult to quantify, and the common albeit inappropriate practise to equate Y-STR match probabilities with Y-STR profile frequencies estimated from population databases has been subject to scientific debate for decades. As a solution to this long-standing problem, we suggest an alternative approach to the calculation of Y-STR match probabilities that involves splitting the group of potential donors other than the suspect into two: (i) his close male relatives (termed his 'pedigree') and (ii) all other males. While an upper limit to the match probability is easily calculated for the second group, it is computationally challenging to derive for the first. We therefore developed a mathematical framework that uses importance sampling to reconstruct and evaluate the Y-STR profiles of untyped members of the suspect's pedigree by way of simulation. Extensive testing with elementary pedigrees of different structure and complexity confirmed that both, the framework and its Python-based software implementation yield match probability estimates that approximate well the correct analytical results, depending upon the number of simulations performed. Our methodology thus facilitates a more appropriate and valid solution to the long-standing problem of interpreting Y-STR profile matches in forensic casework.

Indexed as

Chromosomes, Human, YForensic GeneticsMicrosatellite RepeatsPedigreeDNA FingerprintingHumansMaleProbabilityBiological traceDNA profileForensic geneticsImportance samplingSexual assaultSimulationSuspect populationY-STR

Identifiers

PMID40287458
PMCPMC12033265

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.