Evidence map›Paper›PMID 40286729›Full record

ArticleClinics (Sao Paulo, Brazil)2025

Novel variants of the ATRX gene identified in MYCN non-amplified Neuroblastoma in Brazilian patients.

Thamiris Magalhães Gimenez, Vanessa Pretes Peralta, Ricardo Rodrigues Giorgi, Karina Morikawa, Carolina Camargo Vince, Nathalia Halley, Sheila Aparecida Siqueira, Israel Bendit, Lilian Maria Cristofani, Vicente Odone Filho and 1 more

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Article in Clinics (Sao Paulo, Brazil), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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5 · Who and what money

Authors and funding

11 authors.

Thamiris Magalhães GimenezInstituto do Cancer do Estado de Sao Paulo (ICESP/ITACI), São Paulo, Brazil.
Vanessa Pretes PeraltaLaboratório de Investigação Médica em Pediatria Clínica -Lim-36.Instituto da Criança. Hospital de Clínicas, Faculdade de Medicina, Universidade de São Paulo (HC/FMUSP), São Paulo, Brazil.
Ricardo Rodrigues GiorgiLaboratório de Investigação Médica em Patogênese e Terapia dirigida em Onco-Imuno-Hematologia (Lim 31). Departamento de Hematologia, Hospital das Clínicas, Faculdade de Medicina, Universidade de São Paulo (HCFMUSP). São Paulo, São Paulo, Brazil.
Karina MorikawaInstituto do Cancer do Estado de Sao Paulo (ICESP/ITACI), São Paulo, Brazil.
Carolina Camargo VinceHospital Israelita Albert Einstein (HIAE). São Paulo, Brazil.
Nathalia HalleyHospital Israelita Albert Einstein (HIAE). São Paulo, Brazil.
Sheila Aparecida SiqueiraDivisão de Patologia, Hospital das Clínicas (HCFMUSP), Faculdade de Medicina, Universidade de São Paulo, São Paulo, Brazil.
Israel BenditLaboratório de Investigação Médica em Patogênese e Terapia dirigida em Onco-Imuno-Hematologia (Lim 31). Departamento de Hematologia, Hospital das Clínicas, Faculdade de Medicina, Universidade de São Paulo (HCFMUSP). São Paulo, São Paulo, Brazil.
Lilian Maria CristofaniInstituto do Cancer do Estado de Sao Paulo (ICESP/ITACI), São Paulo, Brazil.
Vicente Odone FilhoDepartamento de Pediatria, Faculdade de Medicina FMUSP, Universidade de São Paulo, São Paulo, SP, Brazil.
Estela Maria NovakFundação Pró-Sangue Hemocentro de São Paulo, Departamento de Genética Molecular e Biotecnologia. São Paulo, Brazil. Electronic address: estelanovak2014@gmail.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundNeuroblastoma is one of the most common extracranial solid tumors in children and it frequently displays high heterogeneity throughout the course of the disease. It has previously been described those changes in the ATRX gene (Alpha Thalassemia/Mental Retardation, X-linked) are the most common recurring events in the indolent clinical subtype (∼30 %) of MYCN amplified neuroblastoma. There is no effective treatment for this type of neuroblastoma, which is associated with overall poor survival. On the other hand, few studies have detected an association between high-risk (stage IV) non-amplified MYCN neuroblastoma patients and mutant ATRX.

methodsIn this study, 37 tumor samples from Brazilian patients with stages I to IV MYCN non-amplified neuroblastoma, according to the International Neuroblastoma Staging System (INSS), were analyzed using the panel Oncomine™ Childhood Cancer Research Assay.

resultsThe authors found two older children (NB1 and NB2) with advanced MYCN non-amplified neuroblastoma carried each one of the two following novel nonsense ATRX variants (p.Gln1670* or p.Glu1984*). These variants created a stop codon in the helicase domain of the ATRX gene, leading to ATRX loss-of-function. These mutations were confirmed by Sanger sequencing and the protein loss-of-function was confirmed by immunohistochemistry. The finding of these heterozygous mutations in two patients with MYCN non-amplified neuroblastoma deserves further investigation. Thus, the authors analyzed each of these cases to better understand how these mutations may be related to disease severity and prognosis.

conclusionATRX loss-of-function from p.Gln1670* or p.Glu1984* mutations turn MYCN non-amplified neuroblastoma more aggressive and similar to what is seen in MYCN amplified neuroblastoma. This information may help clinical decision-making and facilitate establishing an accurate prognosis for patients with MYCN non-amplified neuroblastoma.

Indexed as

MutationNeuroblastomaN-Myc Proto-Oncogene ProteinX-linked Nuclear ProteinBrazilChildChild, PreschoolCodon, NonsenseFemaleHumansInfantMaleNeoplasm StagingATRX protein, humanCodon, NonsenseMYCN protein, humanN-Myc Proto-Oncogene ProteinX-linked Nuclear ProteinAdvanced MYCN Non-Amplified NeuroblastomaATRX Loss-of-FunctionOlder Age at Diagnosis

Identifiers

PMID40286729
PMCPMC12060459

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.