Evidence map›Paper›PMID 40285030›Full record

ArticleViruses2025

Genetic Profiles of Ten African Swine Fever Virus Strains from Outbreaks in Select Provinces of Luzon, Visayas, and Mindanao, Philippines, Between 2021 and 2023.

Andrew D Montecillo, Zyne K Baybay, Jimwel Bryan Christopher Ferrer, Wreahlen Cariaso, Airish Pantua, John Paulo Jose, Rachel Madera, Jishu Shi, Karla Cristine Doysabas, Alan Dargantes and 5 more

Abstract read
In one paragraph

Article in Viruses, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Andrew D MontecilloBioAssets Corporation, City of Santo Tomas 4234, Batangas, Philippines.ORCID 0000-0003-0627-1920
Zyne K BaybayBioAssets Corporation, City of Santo Tomas 4234, Batangas, Philippines.
Jimwel Bryan Christopher FerrerBioAssets Corporation, City of Santo Tomas 4234, Batangas, Philippines.ORCID 0009-0000-6436-9294
Wreahlen CariasoBioAssets Corporation, City of Santo Tomas 4234, Batangas, Philippines.
Airish PantuaBioAssets Corporation, City of Santo Tomas 4234, Batangas, Philippines.
John Paulo JoseIndustrial Technology Development Institute, Department of Science and Technology (DOST-ITDI), Bicutan, Taguig City 1631, Philippines.
Rachel MaderaCenter on Vaccine Evaluation and Alternatives for Antimicrobials, Kansas State University, Manhattan, KS 66506, USA.ORCID 0000-0002-6809-6956
Jishu ShiCenter on Vaccine Evaluation and Alternatives for Antimicrobials, Kansas State University, Manhattan, KS 66506, USA.ORCID 0000-0002-7177-9280
Karla Cristine DoysabasCollege of Veterinary Medicine, Central Mindanao University, Maramag, Bukidnon 8710, Philippines.
Alan DargantesCollege of Veterinary Medicine, Central Mindanao University, Maramag, Bukidnon 8710, Philippines.
Kassey Alsylle T DargantesCollege of Veterinary Medicine, Central Mindanao University, Maramag, Bukidnon 8710, Philippines.
Anna Rochelle A BoongalingProvincial Veterinary Office of Oriental Mindoro, Calapan City 5200, Oriental Mindoro, Philippines.
Alfredo P ManglicmotProvincial Veterinary Office of Oriental Mindoro, Calapan City 5200, Oriental Mindoro, Philippines.
Lucille C VillegasInstitute of Biological Sciences, University of the Philippines Los Baños, Laguna 4031, Philippines.
Homer D PantuaBioAssets Corporation, City of Santo Tomas 4234, Batangas, Philippines.ORCID 0000-0001-6460-2623

Funding

DOST Science for Change Program (S4CP) Business Innovation through S&T for Industry (BIST) Grant 8738
6 · The paper itself

Abstract

An African Swine Fever (ASF) outbreak was first recorded in the Philippines in July 2019. Since then, the disease has spread across provinces in Luzon, Visayas, and Mindanao, causing severe economic consequences for the country's swine industry. Here, we report the genome sequencing of ASF virus strains from outbreaks in several provinces of the Philippines between 2021 and 2023, using a long-read tiled amplicon sequencing approach. The coding-complete genomes generated ranged from 187,609 to 189,540 bp in length, with GC contents of 38.4% to 38.5%. Notably, a strain from the Bataan province had a 1.9 kb deletion at the 5'-end, affecting several coding regions. The strains were characterized using 13 genes and regions; namely the

Indexed as

African Swine FeverAfrican Swine Fever VirusDisease OutbreaksAnimalsGenetic VariationGenome, ViralPhilippinesPhylogenySwineWhole Genome SequencingAfrican swine fever virusASFgenomic epidemiologywhole-genome sequencing

Identifiers

PMID40285030
PMCPMC12031577

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.