Evidence map›Paper›PMID 40284975›Full record

ArticleViruses2025

Development of a Multiplex TaqMan Assay for Rapid Detection of Groundnut Bud Necrosis Virus: A Quarantine Pathogen in the USA.

Anushi Suwaneththiya Deraniyagala, Avijit Roy, Shyam Tallury, Hari Kishan Sudini, Albert K Culbreath, Sudeep Bag

Abstract read
In one paragraph

Article in Viruses, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Anushi Suwaneththiya DeraniyagalaDepartment of Plant Pathology, University of Georgia, Tifton, GA 31793, USA.ORCID 0009-0004-0862-0391
Avijit RoyMolecular Plant Pathology Laboratory, Beltsville Agricultural Research Center (BARC), Unites States Department of Agriculture (USDA)-Agricultural Research Service (ARS), Beltsville, MD 20705, USA.ORCID 0000-0002-2268-9713
Shyam TalluryPlant Genetic Resources Conservation Unit (PGRCU), United States Department of Agriculture (USDA)-Agricultural Research Service (ARS), Griffin, GA 30223, USA.ORCID 0000-0001-6102-9008
Hari Kishan SudiniInternational Crops Research Institute for the Semi-Arid Tropics, Patancheru, Hyderabad 502324, Telangana, India.
Albert K CulbreathDepartment of Plant Pathology, University of Georgia, Tifton, GA 31793, USA.
Sudeep BagDepartment of Plant Pathology, University of Georgia, Tifton, GA 31793, USA.ORCID 0000-0003-3724-7341

Funding

Georgia Peanut Commission 523-GA-198-1653USDA-APHIS-PPQ AP19PPQSUSDA-APHIS-PPQ T00C222USDA- NACA 58-6046-1-008USDA- NACA 59-6046-0-001
6 · The paper itself

Abstract

Groundnut bud necrosis orthotospovirus (GBNV), a tripartite single-stranded RNA virus, poses a significant threat to United States agriculture. GBNV is a quarantine pathogen, and its introduction could lead to severe damage to economically important crops, such as groundnuts, tomatoes, potatoes, peas, and soybeans. For the rapid and accurate detection of GBNV at points of entry, TaqMan reverse transcriptase-quantitative polymerase chain reaction (RT-qPCR) assays were developed and the results validated using conventional reverse transcriptase-polymerase chain reaction (RT-PCR) followed by Sanger sequencing. These assays target highly conserved regions of the nucleocapsid (NP) and movement (MP) proteins within the viral genome. Multiplex GBNV detection assays targeting the NP and MP genes, as well as an internal control plant gene, ACT11, showed efficiency rates between 90% and 100% and R

Indexed as

ArachisMultiplex Polymerase Chain ReactionPlant DiseasesReal-Time Polymerase Chain ReactionTospovirusGenome, ViralRNA, ViralSensitivity and SpecificityUnited StatesRNA, Viralgroundnut bud necrosis orthotospovirus (GBNV)Orthotospovirus arachinecrosisphytosanitary measuresquarantine pathogenTaqMan RT-qPCR

Identifiers

PMID40284975
PMCPMC12031075

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.