Evidence map›Paper›PMID 40284932›Full record

ArticleViruses2025

Monitoring the Emergence of SARS-CoV-2 VOCs in Wastewater and Clinical Samples-A One-Year Study in Santiago de Compostela (Spain).

Marta Lois, David Polo, María Luisa Pérez Del Molino, Amparo Coira, Antonio Aguilera, Jesús L Romalde

Abstract read
In one paragraph

Article in Viruses, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Marta LoisCRETUS, Departament de Microbiología y Parasitología, CIBUS-Faculty de Biología, University de Santiago de Compostela, 15782 Santiago de Compostela, Spain.ORCID 0000-0002-9282-6875
David PoloCRETUS, Departament de Microbiología y Parasitología, CIBUS-Faculty de Biología, University de Santiago de Compostela, 15782 Santiago de Compostela, Spain.
María Luisa Pérez Del MolinoServicio de Microbiología, Hospital Clínico University de Santiago, 15706 Santiago de Compostela, Spain.
Amparo CoiraServicio de Microbiología, Hospital Clínico University de Santiago, 15706 Santiago de Compostela, Spain.
Antonio AguileraServicio de Microbiología, Hospital Clínico University de Santiago, 15706 Santiago de Compostela, Spain.ORCID 0000-0001-6940-241X
Jesús L RomaldeCRETUS, Departament de Microbiología y Parasitología, CIBUS-Faculty de Biología, University de Santiago de Compostela, 15782 Santiago de Compostela, Spain.ORCID 0000-0003-4786-4773

Funding

Xunta de Galicia 2021-CP101Xunta de Galicia ED431C 2022/23
6 · The paper itself

Abstract

Wastewater surveillance has become a valuable tool to monitor the emergence of SARS-CoV-2 variants of concern (VOCs) at the community level. In this study, we aimed to evaluate the presence of Alpha (B.1.1.7), Beta (B.1.351), Delta (B.1617.2), and Omicron (B.1.1.529) VOCs in samples from the inlet of a wastewater treatment plant (WWTP) as well as from two different sewer interceptors (SI-1 and SI-2) from the urban sewage system in Santiago de Compostela (Galicia, NW of Spain) throughout 2021 and January 2022. For this purpose, detection and quantification of the four VOCs was performed using four duplex SARS-CoV-2 allelic discrimination RT-qPCR assays, targeting the S-gene. An N1 RT-qPCR gene assay was used as a reference for the presence of SARS-CoV-2 RNA in wastewater samples. All VOCs were detected in wastewater samples. Alpha, Beta, Delta, and Omicron VOCs were detected in 45.7%, 7.5%, 66.7%, and 72.7% of all samples, respectively. Alpha VOC was dominant during the first part of the study, whereas Delta and Omicron detection peaks were observed in May-June and December 2021, respectively. Some differences were observed among the results obtained for the two city sectors studied, which could be explained by the differences in the characteristics of the population between them. Wastewater-based epidemiology allowed us to track the early circulation and emergence of SARS-CoV-2 variants at a local level, and our results are temporally concordant with clinical data and epidemiological findings reported by the health authorities.

Indexed as

COVID-19SARS-CoV-2WastewaterHumansRNA, ViralSewageSpainRNA, ViralSewageWastewaterCOVID-19duplex RT-qPCRSARS-CoV-2VOCswastewater-based epidemiology

Identifiers

PMID40284932
PMCPMC12030845

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.