Evidence map›Paper›PMID 40284911›Full record

ArticleViruses2025

Whole Genome Sequencing of Lumpy Skin Disease Virus from 2021-2023 in Eastern Eurasia Reveals No More Recombination Signals in the Circulating Pool of Strains.

Alexander Sprygin, Alena Krotova, Ma Jun, Olga Byadovskaya, Vladimir Kirpichenko, Jinchao Chen, Tserenchimed Sainnokhoi, Ilya Chvala

Abstract read
In one paragraph

Article in Viruses, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Alexander SpryginFederal Center for Animal Health, Vladimir 600901, Russia.ORCID 0000-0001-5982-3675
Alena KrotovaFederal Center for Animal Health, Vladimir 600901, Russia.
Ma JunKazakh Scientific Research, Veterinary Institute, Almaty 050016, Kazakhstan.
Olga ByadovskayaFederal Center for Animal Health, Vladimir 600901, Russia.
Vladimir KirpichenkoKazakh Scientific Research, Veterinary Institute, Almaty 050016, Kazakhstan.ORCID 0000-0002-2494-3826
Jinchao ChenGuandong Provincial Key Laboratory of Animal Molecular Design and Precise Breeding, School of Animal Science and Technology, Foshan University, Foshan 528225, China.
Tserenchimed SainnokhoiState Central Veterinary Laboratory, Ulaanbaatar 17024, Mongolia.
Ilya ChvalaFederal Center for Animal Health, Vladimir 600901, Russia.ORCID 0000-0002-1659-3256

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Having spanned thousands of kilometers from Africa through Europe, the Middle East, Central Asia through to the south eastern part of Eurasia in the recent decade, lumpy skin disease virus has now become entrenched in China, Thailand, Vietnam, and South Korea. In light of discovered findings on recombination, cluster 2.5 lineage strains are now dominant and continue to spread throughout Southeast Asia. To gain a better picture of the phylogenetic landscape in the field, whole genome sequencing of 11 LSDV isolates from Russia and Mongolia collected from 2021 to 2023 has been attempted to see the dynamics of recombination signals, as was shown for LSDV circulating in 2017-2019 in Russia and Kazakhstan. Deep sequencing performed direct from skin nodules along with data retrieved from Genbank provides the most recent update on molecular epidemiology of LSDV and demonstrates that no more mosaic variant of LSDV has been observed, and cluster 2.5 lineage is now the dominant lineage currently on the rise in the region with its own patterns of monophyletic evolution. These discoveries may help future investigations aimed at epidemiological surveillance and virus tracking in the context of currently identified lineages worldwide.

Indexed as

Genome, ViralLumpy Skin DiseaseLumpy skin disease virusRecombination, GeneticWhole Genome SequencingAnimalsAsiaEuropeMolecular EpidemiologyPhylogenycapripoxvirusevolutionlumpy skin disease virusmolecular epidemiologyphylogeny

Identifiers

PMID40284911
PMCPMC12031042

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.