Evidence map›Paper›PMID 40284810›Full record

ArticleVeterinary sciences2025

Phylogenetic Analysis and Pathogenicity of Avian Reoviruses Isolated from Viral Arthritis Cases in China 2010-2024.

Liping Liu, Xiao Lu, Xiaozhen Guo, Xiao Gong, Feng Hu, Yifei Jiang, Yuehua Gao, Xiuli Ma, Yufeng Li, Bing Huang and 3 more

Abstract read
In one paragraph

Article in Veterinary sciences, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Liping LiuInstitute of Poultry Science, Shandong Academy of Agricultural Sciences, Jinan 250100, China.
Xiao LuInstitute of Poultry Science, Shandong Academy of Agricultural Sciences, Jinan 250100, China.
Xiaozhen GuoInstitute of Poultry Science, Shandong Academy of Agricultural Sciences, Jinan 250100, China.
Xiao GongQingdao Yibang Biological Engineering Co., Ltd., Qingdao 266000, China.
Feng HuInstitute of Poultry Science, Shandong Academy of Agricultural Sciences, Jinan 250100, China.
Yifei JiangInstitute of Poultry Science, Shandong Academy of Agricultural Sciences, Jinan 250100, China.
Yuehua GaoInstitute of Poultry Science, Shandong Academy of Agricultural Sciences, Jinan 250100, China.
Xiuli MaInstitute of Poultry Science, Shandong Academy of Agricultural Sciences, Jinan 250100, China.
Yufeng LiInstitute of Poultry Science, Shandong Academy of Agricultural Sciences, Jinan 250100, China.
Bing HuangInstitute of Poultry Science, Shandong Academy of Agricultural Sciences, Jinan 250100, China.
Zhuoming QinInstitute of Poultry Science, Shandong Academy of Agricultural Sciences, Jinan 250100, China.
Minxun SongInstitute of Poultry Science, Shandong Academy of Agricultural Sciences, Jinan 250100, China.
Kexiang YuInstitute of Poultry Science, Shandong Academy of Agricultural Sciences, Jinan 250100, China.ORCID 0000-0003-1974-4475

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Avian reovirus (ARV) is one of the main causes of viral arthritis, tenosynovitis, malabsorption syndrome (MAS), runting-stunting syndrome, and immunodepression. In recent years, due to the emergence of new ARV strains, outbreaks of the disease have brought significant economic losses to chicken flocks. To determine the prevalence of ARV in China from 2010 to 2024, a total of 409 tissue samples from different breeding farms were collected from chickens presenting clinical signs of lameness and swollen joints in various flocks located in 18 provinces. As performed on these tissue samples, the ARV-specific reverse transcription-polymerase chain reaction (RT-PCR) assay indicated 111 ARV-positive samples with a positive rate of 27.14%. After viral isolation from the necropsied chicken samples, 69 ARV strains were isolated, and specific sigma C (σC) genes were amplified and sequenced. The sequence analysis of σC genes showed that these 69 isolates were grouped into six clusters, including 14 ARV isolates from cluster I (20.29%), 12 ARV isolates from cluster II (17.39%), 3 ARV isolates from cluster III (4.35%), 8 ARV isolates from cluster IV (11.59%), 3 ARV isolates from cluster V (4.35%), and 29 ARV isolates from cluster VI (42.03%). Except for cluster V, each of the other five clusters could be divided into two subclusters. Homology analysis showed that ARV isolates in clusters II-VI had only 50.3 to 60.8% homology with the commercial S1133 vaccine strain which is derived from cluster I. The ARVs in subcluster Ia had high homology with the S1133 vaccine strain (93.5-98.0%), while the ARVs in subcluster Ib had a low homology with the S1133 strain (73.4-76.4%). Further, the cluster VI viruses, the main epidemic genotype in China, had only 50.3-55.7% homology with the S1133 strain. The results of the pathogenicity test showed that the representative strains of the six different clusters all caused swelling of the footpads in SPF chickens, and the incidence rate was not significantly different. The present study will be helpful in the understanding the prevalence of ARV strains in China and revealed the genetic differences between the ARV isolates and the commercial vaccine strain.

Indexed as

avian reovirushomology analysispathogenicityphylogenetic analysisvariantviral arthritis and tenosynovitis

Identifiers

PMID40284810
PMCPMC12031418

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.