Evidence map›Paper›PMID 40283080›Full record

ArticleLife (Basel, Switzerland)2025

AMPK Knockout Impairs the Formation of Three-Dimensional Spheroids.

Yea-In Park, Rackhyun Park, Siyun Lee, Chunghyeon Lee, Inkyu Yoo, Hakhyun Ka, Yang Hoon Huh, Jongkwang Hong, Junsoo Park

Abstract read
In one paragraph

Article in Life (Basel, Switzerland), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Yea-In ParkDivision of Biological Science and Technology, Yonsei University, Wonju 26493, Republic of Korea.
Rackhyun ParkDepartment of Life Science, Yong-In University, Yongin 17092, Republic of Korea.ORCID 0000-0002-9499-459X
Siyun LeeDivision of Biological Science and Technology, Yonsei University, Wonju 26493, Republic of Korea.ORCID 0009-0005-4336-5389
Chunghyeon LeeDivision of Biological Science and Technology, Yonsei University, Wonju 26493, Republic of Korea.
Inkyu YooDivision of Biological Science and Technology, Yonsei University, Wonju 26493, Republic of Korea.
Hakhyun KaDivision of Biological Science and Technology, Yonsei University, Wonju 26493, Republic of Korea.
Yang Hoon HuhElectron Microscopy Research Center, Korea Basic Science Institute (KBSI), Cheongju 28119, Republic of Korea.
Jongkwang HongDivision of Biological Science and Technology, Yonsei University, Wonju 26493, Republic of Korea.ORCID 0000-0002-8898-6411
Junsoo ParkDivision of Biological Science and Technology, Yonsei University, Wonju 26493, Republic of Korea.ORCID 0000-0002-2355-6760

Funding

Ministry of Education of Korean government 5199990214379
6 · The paper itself

Abstract

AMP-activated protein kinase (AMPK) is an important regulator of cellular energy homeostasis, and AMPK contributes to cell growth, apoptosis, and autophagy. Although most cell studies have been performed using two-dimensional (2D) cell culture, recent studies have demonstrated that the three-dimensional (3D) spheroid technique is helpful in various cell research fields, such as tumor biology, due to its resemblance to the 3D tissue structure. However, the role of AMPK in 3D spheroid formation has not been characterized clearly. This study used the AMPK knockout cell line to examine the role of AMPK in 3D spheroid formation and is the first report describing the generation of 3D spheroids using AMPK knockout cells. While control cells produced round spheroids with a similar length-to-width ratio, AMPK knockout produced an oval shape with a more significant length-to-width ratio. We demonstrate that AMPK knockout spheroids contain significantly more prominent lysosomes in each cell, indicating that autophagic flux is impaired in 3D spheroids. Finally, flow cytometry analysis showed that AMPK knockout spheroids contain more apoptotic cells than control cells. These results indicate that AMPK is required for efficient 3D spheroid formation.

Indexed as

3D cultureAMPKknockoutlysosomespheroid

Identifiers

PMID40283080
PMCPMC12028351

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.