Evidence map›Paper›PMID 40281663›Full record

ArticleThe plant genome2025

Genome-wide association study and BSR-seq identify nitrate reductase-related genes in rice landraces (Oryza sativa L.).

Shuangshuang Luo, Zuyu Liao, Shilv Huang, Xiuzhong Xia, Zongqiong Zhang, Baoxuan Nong, Tongping Luo, Chenli Zhu, Can Chen, Hui Guo and 8 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in The plant genome, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Shuangshuang LuoCollege of Agriculture, Guangxi University, Nanning, China.
Zuyu LiaoGuangxi Key Laboratory of Rice Genetics and Breeding, Rice Research Institute, Guangxi Academy of Agricultural Sciences, Nanning, China.
Shilv HuangMicrobiology Research Institute, Guangxi Academy of Agricultural Sciences, Nanning, China.
Xiuzhong XiaGuangxi Key Laboratory of Rice Genetics and Breeding, Rice Research Institute, Guangxi Academy of Agricultural Sciences, Nanning, China.
Zongqiong ZhangGuangxi Key Laboratory of Rice Genetics and Breeding, Rice Research Institute, Guangxi Academy of Agricultural Sciences, Nanning, China.
Baoxuan NongGuangxi Key Laboratory of Rice Genetics and Breeding, Rice Research Institute, Guangxi Academy of Agricultural Sciences, Nanning, China.
Tongping LuoGuangxi Key Laboratory of Rice Genetics and Breeding, Rice Research Institute, Guangxi Academy of Agricultural Sciences, Nanning, China.
Chenli ZhuGuangxi Key Laboratory of Rice Genetics and Breeding, Rice Research Institute, Guangxi Academy of Agricultural Sciences, Nanning, China.
Can ChenGuangxi Key Laboratory of Rice Genetics and Breeding, Rice Research Institute, Guangxi Academy of Agricultural Sciences, Nanning, China.
Hui GuoGuangxi Key Laboratory of Rice Genetics and Breeding, Rice Research Institute, Guangxi Academy of Agricultural Sciences, Nanning, China.
Rui FengGuangxi Key Laboratory of Rice Genetics and Breeding, Rice Research Institute, Guangxi Academy of Agricultural Sciences, Nanning, China.
Yinghua PanGuangxi Key Laboratory of Rice Genetics and Breeding, Rice Research Institute, Guangxi Academy of Agricultural Sciences, Nanning, China.
Shuhui LiangGuangxi Key Laboratory of Rice Genetics and Breeding, Rice Research Institute, Guangxi Academy of Agricultural Sciences, Nanning, China.
Yongcheng LiCollege of Agriculture, Guangxi University, Nanning, China.
Jianhui LiuCollege of Agriculture, Guangxi University, Nanning, China.
Yongfu QiuCollege of Agriculture, Guangxi University, Nanning, China.
Danting LiGuangxi Key Laboratory of Rice Genetics and Breeding, Rice Research Institute, Guangxi Academy of Agricultural Sciences, Nanning, China.ORCID https://orcid.org/0000-0002-3510-8236
Xinghai YangGuangxi Key Laboratory of Rice Genetics and Breeding, Rice Research Institute, Guangxi Academy of Agricultural Sciences, Nanning, China.ORCID https://orcid.org/0000-0002-3476-2578

Funding

Guangxi Department of Science and TechnologyGuangxi Natural Science Foundation of ChinaNational Natural Science Foundation of China 31860371National Natural Science Foundation of China 32060476National Natural Science Foundation of China 32260487National Natural Science Foundation of China 32360519
6 · The paper itself

Abstract

Nitrogen (N) is an essential nutrient for rice (Oryza sativa L.) growth and development. However, the lower nitrogen use efficiency (NUE) results in an N fertilizer surplus, which causes many environmental problems. In this study, genome-wide association studies were used to detect nitrate reductase (NR)-related loci in 419 rice landraces. Using the general linear model (GLM), mixed linear model (MLM), linear model (LM), and linear mixed model (LMM), we found six, nine, seven, and six significant single-nucleotide polymorphisms (SNPs) associated (p < 1 × 10

Indexed as

Nitrate ReductaseOryzaGenes, PlantGenome-Wide Association StudyPlant ProteinsPolymorphism, Single NucleotideQuantitative Trait LociNitrate ReductasePlant Proteins

Identifiers

PMID40281663
PMCPMC12032047

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.