Evidence map›Paper›PMID 40281571›Full record

ArticleRespiratory research2025

Characteristics of upper and lower respiratory tract microbiota after lung transplantation.

Yuhang Cai, Yuchen Fan, Ao Chen, Xiaohua Wang, Lulin Wang, Jiaqi Chen, Zhang Wang, Jia Li, Xinzhu Yi, Chunrong Ju

Abstract read
In one paragraph

Article in Respiratory research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
  3. Frontiers in public health · 2025
    Article
4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Yuhang Cai *State Key Laboratory of Respiratory Disease, National Clinical Research Center for Respiratory Disease, Guangzhou Institute of Respiratory Health, The First Affiliated Hospital of Guangzhou Medical University, Guangzhou, Guang Dong, China.
Yuchen Fan *Institute of Ecological Sciences, School of Life Sciences, South China Normal University, Guangzhou, Guang Dong, China.
Ao Chen *The Fifth Affiliated Hospital of Guangzhou Medical University, Guangzhou, Guang Dong, China.
Xiaohua WangState Key Laboratory of Respiratory Disease, National Clinical Research Center for Respiratory Disease, Guangzhou Institute of Respiratory Health, The First Affiliated Hospital of Guangzhou Medical University, Guangzhou, Guang Dong, China.
Lulin WangState Key Laboratory of Respiratory Disease, National Clinical Research Center for Respiratory Disease, Guangzhou Institute of Respiratory Health, The First Affiliated Hospital of Guangzhou Medical University, Guangzhou, Guang Dong, China.
Jiaqi ChenState Key Laboratory of Respiratory Disease, National Clinical Research Center for Respiratory Disease, Guangzhou Institute of Respiratory Health, The First Affiliated Hospital of Guangzhou Medical University, Guangzhou, Guang Dong, China.
Zhang WangInstitute of Ecological Sciences, School of Life Sciences, South China Normal University, Guangzhou, Guang Dong, China.
Jia LiState Key Laboratory of Respiratory Disease, National Clinical Research Center for Respiratory Disease, Guangzhou Institute of Respiratory Health, The First Affiliated Hospital of Guangzhou Medical University, Guangzhou, Guang Dong, China. jiali@gzhmu.edu.cn.
Xinzhu YiInstitute of Ecological Sciences, School of Life Sciences, South China Normal University, Guangzhou, Guang Dong, China. yixinzhu@m.scnu.edu.cn.
Chunrong JuState Key Laboratory of Respiratory Disease, National Clinical Research Center for Respiratory Disease, Guangzhou Institute of Respiratory Health, The First Affiliated Hospital of Guangzhou Medical University, Guangzhou, Guang Dong, China. juchunrongju@126.com.

Funding

Foundation from Guangzhou Institute of Respiratory Health 2019GIRHZ04Natural Science Foundation of Guangdong Province 2022A1515012216Zhongnanshan Medical Foundation of Guangdong Province ZNSA-2020013
6 · The paper itself

Abstract

backgroundThe composition and characteristics of airway microbiota offer critical insights for clinical decision-making. Current research on chronic lung diseases shows differences in the composition and characteristics of upper and lower respiratory tract microbiota compared with healthy individuals. However, the temporal changes of these microbial communities in lung transplant recipients remain poorly characterized.

methodsThis is a longitudinal prospective study. Respiratory specimens were collected regularly from lung transplant recipients for testing and analysis. A total of 150 bronchoalveolar lavage fluid (BALF) samples, 150 throat swab samples, 51 sputum samples, and 36 lung tissue samples were collected from the recipients, at 7 days, 14 days, 1 month, 2 months, 3 months, and 6 months post-transplant for 16S rRNA gene sequencing and analysis.

resultsOur study showed that there were significant differences in α-diversity and β-diversity among lung tissue, throat swab, and sputum samples, although α-diversity did not show a significant difference between lung tissue and BALF. Most amplicon sequence variants (ASVs) belonged to the families Enterobacteriaceae, Pseudomonadaceae, and Stenotrophomonas in BALF, while most ASVs belonged to the genera Streptococcus, Pseudomonadaceae, and Stenotrophomonas in sputum samples. Regarding dynamic changes, Corynebacterium and Staphylococcus were more prevalent in the early post-operative period but gradually decreased by 7 days post-operatively, while the common microbiota found in healthy populations based on literature became the most abundant ASVs at 6 months post-operatively in our study participants. Pseudomonadaceae and Stenotrophomonas contributed to the similarity in the composition of upper and lower respiratory microbiota.

conclusionsThis study demonstrates that lung transplant recipients exhibit unique characteristics in their upper and lower respiratory tract microbiota, which are distinct ecological profiles, and both undergo significant changes within 6 months post-operatively. The similarity between upper and lower respiratory tract microbiota is associated with microbial diversity and taxonomic dominance. CLINICAL TRIAL: The clinical trial was registered at Chinese Clinical Trial Registry (ChiCTR2200056908) in February 2022.

Indexed as

LungLung TransplantationMicrobiotaAdultAgedBronchoalveolar Lavage FluidFemaleHumansLongitudinal StudiesMaleMiddle AgedProspective StudiesSputum16S rRNALung transplantUpper versus lower airway Microbiome

Identifiers

PMID40281571
PMCPMC12023598

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.