Evidence map›Paper›PMID 40281344›Full record

ArticleNature chemical biology2025

Domain coupling in activation of a family C GPCR.

Naomi R Latorraca, Sam Sabaat, Chris H Habrian, Julia Bleier, Cherise Stanley, Colin D Kinz-Thompson, Susan Marqusee, Ehud Y Isacoff

Abstract read
In one paragraph

Article in Nature chemical biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
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  5. Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors.

Naomi R LatorracaDepartment of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA, USA.ORCID http://orcid.org/0000-0002-8310-8708
Sam SabaatDepartment of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA, USA.
Chris H HabrianDepartment of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA, USA.
Julia BleierDepartment of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA, USA.
Cherise StanleyDepartment of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA, USA.
Colin D Kinz-ThompsonDepartment of Chemistry, Rutgers University-Newark, Newark, NJ, USA.
Susan MarquseeDepartment of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA, USA.ORCID http://orcid.org/0000-0001-7648-2163
Ehud Y IsacoffDepartment of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA, USA. ehud@berkeley.edu.ORCID http://orcid.org/0000-0003-4775-9359

Funding

Optical control of neuromodulatory GPCRsRF1MH123246 · NIMH · UNIVERSITY OF CALIFORNIA BERKELEY · PI ISACOFF, EHUD, TRAUNER, DIRK HARTWIG · 2020 to 2020
$3.3M
Breakthrough Molecular Dynamics Research via an Anton2 SupercomputerR01GM116961 · NIGMS · CARNEGIE-MELLON UNIVERSITY · PI BLOOD, PHILIP D. · 2016 to 2023
$3.0M
Sequence and Environmental Determinants of the Protein Energy LandscapeR35GM149319 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI SUSAN MARQUSEE · 2023 to 2026
$1.7M
Conformational mechanisms of mGluR gating and regulationR01NS119826 · NINDS · UNIVERSITY OF CALIFORNIA BERKELEY · PI ISACOFF, EHUD · 2021 to 2024
$1.6M
Decoding Structural Determinants of Efficacy and Specificity in a GPCR SubfamilyK99GM148823 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI LATORRACA, NAOMI · 2023 to 2024
$212k
McKnight Endowment Fund for Neuroscience PecotNational Science Foundation (NSF) CHE2137630NIGMS NIH HHS K99 GM148823NIGMS NIH HHS R01 GM116961NIGMS NIH HHS R35 GM149319NIMH NIH HHS RF1 MH123246NINDS NIH HHS R01 NS119826U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) K99GM148823U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) R35GM149319U.S. Department of Health & Human Services | NIH | National Institute of Mental Health (NIMH) 1RF1MH123246U.S. Department of Health & Human Services | NIH | National Institute of Neurological Disorders and Stroke (NINDS) R01NS119826
6 · The paper itself

Abstract

The G protein-coupled metabotropic glutamate receptors form homodimers and heterodimers with highly diverse responses to glutamate and varying physiological functions. We employ molecular dynamics, single-molecule spectroscopy and hydrogen-deuterium exchange to dissect the activation pathway triggered by glutamate. We find that activation entails multiple loosely coupled steps, including formation of an agonist-bound, pre-active intermediate whose transition to active conformations forms dimerization interface contacts that set efficacy. The agonist-bound receptor populates at least two additional intermediates en route to G protein-coupling conformations. Sequential transitions into these states act as 'gates', which attenuate the effects of glutamate. Thus, the agonist-bound receptor is remarkably dynamic, with low occupancy of G protein-coupling conformations, providing considerable headroom for modulation by allosteric ligands. Sequence variation within the dimerization interface, as well as altered conformational coupling in receptor heterodimers, may contribute to precise decoding of glutamate signals over broad spatial and temporal scales.

Indexed as

Receptors, G-Protein-CoupledReceptors, Metabotropic GlutamateAllosteric RegulationGlutamic AcidHumansLigandsMolecular Dynamics SimulationProtein ConformationProtein DomainsProtein MultimerizationGlutamic AcidLigandsReceptors, G-Protein-CoupledReceptors, Metabotropic Glutamate

Identifiers

PMID40281344
PMCPMC12394075

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.