Evidence map›Paper›PMID 40279384›Full record

ArticleThe Journal of infectious diseases2025

Cellular Tropism and Viral Genetics in Appendix Tissue Reservoirs of Subtype C HIV-1-Infected Aviremic Persons.

Zhou Liu, Peter Julius, Dicle Yalcin, Guobin Kang, Cordilia Maria Himwaze, Luchenga Adam Mucheleng'anga, Luis Del Valle, John T West, Charles Wood

Abstract read
In one paragraph

Article in The Journal of infectious diseases, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Zhou LiuNebraska Center for Virology, School of Biological Sciences, University of Nebraska-Lincoln, Lincoln, Nebraska, USA.
Peter JuliusDepartment of Pathology and Microbiology, University of Zambia School of Medicine, Lusaka, Zambia.
Dicle YalcinDepartment of Interdisciplinary Oncology, Louisiana Cancer Research Center, Louisiana State University Health Sciences Center, New Orleans, Louisiana, USA.ORCID 0000-0001-5616-6059
Guobin KangDepartment of Interdisciplinary Oncology, Louisiana Cancer Research Center, Louisiana State University Health Sciences Center, New Orleans, Louisiana, USA.ORCID 0009-0009-7327-2545
Cordilia Maria HimwazeDepartment of Pathology and Microbiology, University of Zambia School of Medicine, Lusaka, Zambia.
Luchenga Adam Mucheleng'angaOffice of the State Forensic Pathologist, Ministry of Home Affairs, Lusaka, Zambia.
Luis Del ValleDepartments of Pathology and Medicine, Louisiana Cancer Research Center, Louisiana State University Health Sciences Center, New Orleans, Louisiana, USA.ORCID 0000-0003-3894-9206
John T WestDepartment of Interdisciplinary Oncology, Louisiana Cancer Research Center, Louisiana State University Health Sciences Center, New Orleans, Louisiana, USA.ORCID 0000-0003-4594-6855
Charles WoodNebraska Center for Virology, School of Biological Sciences, University of Nebraska-Lincoln, Lincoln, Nebraska, USA.

Funding

Supplement: Fogarty Training in HIV- and AIDS Associated Diseases/MalignanciesD43TW001429 · FIC · UNIVERSITY OF NEBRASKA LINCOLN · PI WOOD, CHARLES · 2000 to 2015
$7.2M
Project 3U54CA277846 · NCI · LSU HEALTH SCIENCES CENTER · PI Charles Wood · 2023 to 2026
$4.7M
The impact of Cannabis on inflammation and HIV-1 reservoirs in Zambia (Supplement 2)R01DA044920 · NIDA · UNIVERSITY OF NEBRASKA LINCOLN · PI WOOD, CHARLES · 2017 to 2022
$4.0M
Zambia AIDS Malignancies Diagnosis and Pathogenesis Program SupplementU54CA221204 · NCI · UNIVERSITY OF NEBRASKA LINCOLN · PI WOOD, CHARLES · 2017 to 2022
$3.8M
AIDS Malignancies Training and Research International Program (AMTRIP)D43TW010354 · FIC · UNIVERSITY OF NEBRASKA LINCOLN · PI Chipepo Kankasa, Charles Wood · 2016 to 2026
$2.8M
Neuropathogenesis and Neuroinvasiveness of Subtype C Human Immunodeficiency VirusR01NS074903 · NINDS · UNIVERSITY OF NEBRASKA LINCOLN · PI WOOD, CHARLES · 2011 to 2015
$1.7M
FIC NIH HHS D43 TW001429FIC NIH HHS D43 TW010354Fogarty International D43 TWO10354NCI NIH HHS U54 CA221204NCI NIH HHS U54 CA277846NIDA NIH HHS R01 DA044920NIH HHS R01DA044920NIH HHS U54CA221204NINDS NIH HHS R01 NS074903
6 · The paper itself

Abstract

backgroundAlthough antiretroviral therapy (ART) can suppress plasma viral loads in people living with human immunodeficiency virus (HIV), it cannot eliminate HIV-1 proviruses persisting in various tissue reservoirs, and HIV-1 will rebound after ART cessation. We have identified the appendix as a novel HIV tissue reservoir, but nothing is known about the provirus and the cellular tropism in this tissue.

methodsWe used single-genome analysis of HIV-1 env DNA and compared the viral sequences from appendix tissues and lymph nodes of the same people living with HIV-1. Sequential multiplex immunofluorescence labeling and RNAscope in situ hybridization on formalin-fixed, paraffin-embedded appendix sections were performed to identify cell types harboring HIV-1 proviral DNA in the appendix, by visualizing viral and cellular biomarkers colocalization.

resultsThe viral populations from the appendix were less heterogeneous than those from the lymph nodes in aviremic individuals, suggesting there is reduced ART selective pressure or the presence of appendix tropic HIV-1. Furthermore, we demonstrated that follicular dendritic cell (FDCs), rather than CD4+ T cells within the appendix, are the major cell type harboring subtype C HIV-1. Notably, although some subtype C HIV-1 signals could be remaining virions captured by FDCs even in aviremic individuals, HIV-1 proviral DNA was detected in some FDCs in the appendix tissues of aviremic individuals, indicating the presence of infected FDCs.

conclusionsThese results highlight the importance of analyzing all potential tissue and cellular tropism across different HIV-1 subtypes, to inform tailored therapeutic strategies for the diverse reservoirs that may differ across subtypes.

Indexed as

AppendixDisease ReservoirsHIV-1HIV InfectionsViral TropismAdultCD4-Positive T-LymphocytesDNA, ViralFemaleHumansLymph NodesMaleMiddle AgedProvirusesViral LoadDNA, ViralFollicular dendritic cellsHIV-1 reservoirHuman appendixSubtype C HIV-1Viral genetics

Identifiers

PMID40279384
PMCPMC12308663

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.