Evidence map›Paper›PMID 40278019›Full record

ArticleJournal of imaging2025

Riemannian Manifolds for Biological Imaging Applications Based on Unsupervised Learning.

Ilya Larin, Alexander Karabelsky

Abstract read
In one paragraph

Article in Journal of imaging, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Ilya LarinCenter for Translational Medicine, Sirius University of Science and Technology, Federal Territory Sirius, 1 Olympic Ave., Sirius 354340, Russia.ORCID 0000-0002-5005-0749
Alexander KarabelskyCenter for Translational Medicine, Sirius University of Science and Technology, Federal Territory Sirius, 1 Olympic Ave., Sirius 354340, Russia.ORCID 0000-0002-6391-5182

Funding

Ministry of Science and Higher Education of the Russian Federation Agreement No. 075-10-2021-093; Project GTH-RND-2112
6 · The paper itself

Abstract

The development of neural networks has made the introduction of multimodal systems inevitable. Computer vision methods are still not widely used in biological research, despite their importance. It is time to recognize the significance of advances in feature extraction and real-time analysis of information from cells. Teacherless learning for the image clustering task is of great interest. In particular, the clustering of single cells is of great interest. This study will evaluate the feasibility of using latent representation and clustering of single cells in various applications in the fields of medicine and biotechnology. Of particular interest are embeddings, which relate to the morphological characterization of cells. Studies of C2C12 cells will reveal more about aspects of muscle differentiation by using neural networks. This work focuses on analyzing the applicability of the latent space to extract morphological features. Like many researchers in this field, we note that obtaining high-quality latent representations for phase-contrast or bright-field images opens new frontiers for creating large visual-language models. Graph structures are the main approaches to non-Euclidean manifolds. Graph-based segmentation has a long history, e.g., the normalized cuts algorithm treated segmentation as a graph partitioning problem-but only recently have such ideas merged with deep learning in an unsupervised manner. Recently, a number of works have shown the advantages of hyperbolic embeddings in vision tasks, including clustering and classification based on the Poincaré ball model. One area worth highlighting is unsupervised segmentation, which we believe is undervalued, particularly in the context of non-Euclidean spaces. In this approach, we aim to mark the beginning of our future work on integrating visual information and biological aspects of individual cells to multimodal space in comparative studies in vitro.

Indexed as

C2C12Riemannian manifoldt-SNE representation

Identifiers

PMID40278019
PMCPMC12027720

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.