Evidence map›Paper›PMID 40277946›Full record

ArticleCells2025

Mimicking the Liver Sinusoidal Endothelial Cell Niche In Vitro to Enhance Fenestration in a Genetic Model of Systemic Inflammation.

Dibakar Borah, Oliwia Blacharczyk, Karolina Szafranska, Izabela Czyzynska-Cichon, Sara Metwally, Konrad Szymanowski, Wolfgang Hübner, Jerzy Kotlinowski, Ewelina Dobosz, Peter McCourt and 3 more

Abstract read
In one paragraph

Article in Cells, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Dibakar BorahDepartment of Biophysical Microstructures, Institute of Nuclear Physics, Polish Academy of Sciences, ul. Radzikowskiego 142, 31-342 Krakow, Poland.ORCID 0009-0003-3890-497X
Oliwia BlacharczykDepartment of Biophysical Microstructures, Institute of Nuclear Physics, Polish Academy of Sciences, ul. Radzikowskiego 142, 31-342 Krakow, Poland.
Karolina SzafranskaVascular Biology Research Group, Department of Medical Biology University of Tromsø-The Arctic University of Norway, 9019 Tromsø, Norway.ORCID 0000-0001-5852-2109
Izabela Czyzynska-CichonJagiellonian Centre for Experimental Therapeutics (JCET), Jagiellonian University, Bobrzynskiego 14, 30-348 Krakow, Poland.ORCID 0000-0002-2684-1057
Sara MetwallyDepartment of Biophysical Microstructures, Institute of Nuclear Physics, Polish Academy of Sciences, ul. Radzikowskiego 142, 31-342 Krakow, Poland.ORCID 0000-0003-0639-1754
Konrad SzymanowskiDepartment of Biophysical Microstructures, Institute of Nuclear Physics, Polish Academy of Sciences, ul. Radzikowskiego 142, 31-342 Krakow, Poland.
Wolfgang HübnerBiomolecular Photonics, Faculty of Physics, Bielefeld University, 33615 Bielefeld, Germany.ORCID 0000-0002-1128-6468
Jerzy KotlinowskiDepartment of General Biochemistry, Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, Gronostajowa 7, 30-387 Krakow, Poland.ORCID 0000-0002-3133-3364
Ewelina DoboszDepartment of Microbiology, Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, Gronostajowa 7, 30-387 Krakow, Poland.ORCID 0000-0002-0151-9723
Peter McCourtVascular Biology Research Group, Department of Medical Biology University of Tromsø-The Arctic University of Norway, 9019 Tromsø, Norway.ORCID 0000-0001-5072-4590
Thomas HuserBiomolecular Photonics, Faculty of Physics, Bielefeld University, 33615 Bielefeld, Germany.ORCID 0000-0003-2348-7416
Malgorzata LekkaDepartment of Biophysical Microstructures, Institute of Nuclear Physics, Polish Academy of Sciences, ul. Radzikowskiego 142, 31-342 Krakow, Poland.ORCID 0000-0003-0844-8662
Bartlomiej ZapotocznyDepartment of Biophysical Microstructures, Institute of Nuclear Physics, Polish Academy of Sciences, ul. Radzikowskiego 142, 31-342 Krakow, Poland.ORCID 0000-0003-2129-3714

Funding

European Union's European Innovation Council (EIC) PATHFINDER Open Programme, project DeLIVERy and the Hop-On Facility HORIZON-WIDERA program associated with DeLIVERy No. 101046928European Union's Horizon research and innovation programme under the Marie Skłodow-ska-Curie project ImAgE-D No 101119613Polish National Science Centre UMO-2019/35/D/NZ3/01804
6 · The paper itself

Abstract

Liver sinusoidal endothelial cells (LSECs) play a crucial role in hepatic homeostasis, clearance, and microcirculatory regulation. Their fenestrations-patent transcellular pores-are essential for proper liver function, yet disappear in pathological conditions such as liver fibrosis and inflammation through a process known as defenestration. Defenestrated sinusoids are often linked to the liver stiffening that occurs through mechanotransduction-regulated processes. We performed a detailed characterization of polyacrylamide (PAA) hydrogels using atomic force microscopy (AFM), rheometry, scanning electron microscopy, and fluorescence microscopy to assess their potential as biomimetic substrates for LSECs. We additionally implemented AFM; quantitative fluorescence microscopy, including high-resolution structured illumination microscopy (HR-SIM); and an endocytosis assay to characterize the morphology and function of LSECs. Our results revealed significant local variations in hydrogel stiffness and differences in pore sizes. The primary LSECs cultured on these substrates had a range of stiffnesses and were analyzed with regard to their number of fenestrations, cytoskeletal organization, and endocytic function. To explore mechanotransduction in inflammatory liver disease, we investigated LSECs from a genetic model of systemic inflammation triggered by the deletion of Mcpip1 in myeloid leukocytes and examined their ability to restore their fenestrations on soft substrates. Our study demonstrates the beneficial effect of soft hydrogels on LSECs. Control cells exhibited a similar fenestrated morphology and function compared to cells cultured on plastic substrates. However, the pathological LSECs from the genetic model of systemic inflammation regained their fenestrations when cultured on soft hydrogels. This observation supports previous findings on the beneficial effects of soft substrates on LSEC fenestration status.

Indexed as

Endothelial CellsInflammationLiverAnimalsHydrogelsMechanotransduction, CellularMiceHydrogelsactin cytoskeletonatomic force microscopyelastic propertiesfenestrationsliver sinusoidal endothelial cellsmechanotransductionpolyacrylamide

Identifiers

PMID40277946
PMCPMC12025456

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.