Evidence map›Paper›PMID 40273680›Full record

ArticlePoultry science2025

Integrated transcriptomic and metabolomic analysis of goose epididymis reveals molecular markers associated with sperm mobility.

Xiaofang Ren, Ke Jiang, Jiaxin Yin, Zhigang Ma, Zhifeng Chen, Kun Yang, Shengjun Liu

Abstract read
In one paragraph

Article in Poultry science, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Xiaofang RenCollege of Animal Science and Technology, Heilongjiang Bayi Agricultural University, Daqing 163319, PR China. Electronic address: 1499217641@qq.com.
Ke JiangCollege of Animal Science and Technology, Heilongjiang Bayi Agricultural University, Daqing 163319, PR China. Electronic address: 2995350985@qq.com.
Jiaxin YinCollege of Animal Science and Technology, Heilongjiang Bayi Agricultural University, Daqing 163319, PR China. Electronic address: 1462615135@qq.com.
Zhigang MaHeilongjiang Academy of Agricultural Sciences, Animal Husbandry Research Institute, No. 2, Heyi Street, Qiqihar 161000, PR China.
Zhifeng ChenHeilongjiang Academy of Agricultural Sciences, Animal Husbandry Research Institute, No. 2, Heyi Street, Qiqihar 161000, PR China. Electronic address: qqhr139@sina.com.
Kun YangHeilongjiang Academy of Agricultural Sciences, Animal Husbandry Research Institute, No. 2, Heyi Street, Qiqihar 161000, PR China. Electronic address: 984592170@qq.com.
Shengjun LiuCollege of Animal Science and Technology, Heilongjiang Bayi Agricultural University, Daqing 163319, PR China; Key Laboratory of Exploration and Innovative Utilization of White Goose Germplasm Resources in the Cold Region of Heilongjiang Province, Daqing 163319, PR China. Electronic address: lsj4396@163.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The low fertility of geese has long constrained the development of the geese industry. Sperm quality plays a critical role in fertility, and sperm mobility (SM) serves as a key indicator of sperm quality. However, the molecular mechanisms underlying SM remain largely unexplored. The objective of this study was to identify molecular markers associated with SM in the epididymis of Zi geese (Anser cygnoides L.). The SM of 40 one-year-old ganders was assessed. Based on SM values, six ganders were selected: three with the highest SM (H group: n = 3, SM = 0.43 ± 0.02) and three with the lowest SM (L group: n = 3, SM = 0.10 ± 0.01, P < 0.001). Semen quality parameters, fertility, and hormone levels were measured in both groups. Epididymal tissues from the six ganders were subjected to transcriptomic and metabolomic analyses. Results identified 438 differentially expressed genes (DEGs) between the groups, primarily associated with transmembrane transport of proteins and ions. These DEGs were enriched in pathways such as "alanine, aspartate and glutamate metabolism," "butanoate metabolism," and the "PPAR signaling pathway." Among these, ATP12A, ATP1B4, and CNDP1 were identified as key genes regulating SM. Additionally, 486 metabolites showed significant differences between the groups in both positive and negative ion modes. Integration of transcriptomic and metabolomic data revealed critical gene-metabolite pairs, including CNDP1-citric acid, implicated in SM regulation. Notably, the "arginine biosynthesis" pathway was significantly enriched by both DEGs and differential metabolites. In conclusion, this study provides novel insights into the molecular mechanisms regulating SM in the epididymis and lays a theoretical foundation for geese breeding programs.

Indexed as

EpididymisGeeseMetabolomeSperm MotilityTranscriptomeAnimalsBiomarkersGene Expression ProfilingMaleMetabolomicsSemen AnalysisBiomarkersEpididymisMetabolomicsSperm mobilityTranscriptomicsZi goose

Identifiers

PMID40273680
PMCPMC12051571

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.