Evidence map›Paper›PMID 40272196›Full record

ArticleMicrobiology spectrum2025

Comparative genomic analysis of metal-tolerant bacteria reveals significant differences in metal adaptation strategies.

Dai Di Chen, Liu Lian Zhang, Jiu Hua Zhang, Wen Ting Ban, Qingxin Li, Jin Chuan Wu

Abstract readComparative Study
In one paragraph

Article in Microbiology spectrum, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Isolation and Genome Analysis ofMicroorganisms · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Dai Di ChenGuangdong Engineering Technology Research Center of Enzyme and Biocatalysis, Institute of Biological and Medical Engineering, Guangdong Academy of Sciences, Guangzhou, China.
Liu Lian ZhangGuangdong Engineering Technology Research Center of Enzyme and Biocatalysis, Institute of Biological and Medical Engineering, Guangdong Academy of Sciences, Guangzhou, China.
Jiu Hua ZhangGuangdong Engineering Technology Research Center of Enzyme and Biocatalysis, Institute of Biological and Medical Engineering, Guangdong Academy of Sciences, Guangzhou, China.
Wen Ting BanGuangdong Engineering Technology Research Center of Enzyme and Biocatalysis, Institute of Biological and Medical Engineering, Guangdong Academy of Sciences, Guangzhou, China.
Qingxin LiGuangdong Engineering Technology Research Center of Enzyme and Biocatalysis, Institute of Biological and Medical Engineering, Guangdong Academy of Sciences, Guangzhou, China.
Jin Chuan WuGuangdong Engineering Technology Research Center of Enzyme and Biocatalysis, Institute of Biological and Medical Engineering, Guangdong Academy of Sciences, Guangzhou, China.ORCID 0009-0006-1801-4883

Funding

Basic and Applied Basic Research Foundation of Guangdong Province 2022A1515110562Guangdong Academy of Sciences 2020GDASYL-20200102009Guangdong Academy of Sciences 2020GDASYL-20200102010Guangdong Academy of Sciences 2022GDASZH-2022010110Guangdong Provincial Department of Science and Technology (GDSTC) 2021CX020301
6 · The paper itself

Abstract

Metal-tolerant bacteria have been commercially used in wastewater treatment, bio-fertilizer, and soil remediation, etc. However, the mechanisms underlying their actions are not yet fully understood. We isolated metal-tolerant bacteria from the rhizosphere soil samples with metal-enriched media containing Cu, Fe, or Mn, sequenced and compared the genomes, and analyzed their metal adaptation strategies at genomic levels to better understand their action mechanisms. Totally, 32 metal-tolerant isolates were identified and classified into 12 genera based on phylogenetic analysis. The determination of maximum tolerance concentration and the effect of metal ions on the isolates indicated that IMPORTANCE: Metal-tolerant bacteria have wide applications in environmental, agricultural, and ecological fields, but their action strategies are not yet fully understood. We isolated 32 metal-tolerant bacteria from the rhizosphere soil samples. Among them,

Indexed as

Adaptation, PhysiologicalBacteriaMetalsMetals, HeavyCopperGenome, BacterialGenomicsIronPhylogenyRhizosphereSoil MicrobiologyCopperIronMetalsMetals, Heavyapplicationcombined usegenomic analysismetal-stress-responsemetal-tolerant bacteria

Identifiers

PMID40272196
PMCPMC12131726

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.