Evidence map›Paper›PMID 40270583›Full record

ArticleStatistics and its interface2023

Smooth online parameter estimation for time varying VAR models with application to rat local field potential activity data.

Anass El Yaagoubi Bourakna, Marco Pinto, Norbert Fortin, Hernando Ombao

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Article in Statistics and its interface, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

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0 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

4 authors.

Anass El Yaagoubi BouraknaKing Abdullah University of Science and Technology.
Marco PintoOslo Metropolitan University.
Norbert FortinUniversity of California Irvine.
Hernando OmbaoKing Abdullah University of Science and Technology.

Funding

Nicotinic enhancement of auditory-cognitive processingR01DC017687 · NIDCD · UNIVERSITY OF CALIFORNIA-IRVINE · PI METHERATE, RAJU · 2019 to 2023
$3.1M
Scalable Bayesian Stochastic Process Models for Neural Data AnalysisR01MH115697 · NIMH · UNIVERSITY OF CALIFORNIA-IRVINE · PI SHAHBABA, BABAK · 2018 to 2022
$1.7M
NIDCD NIH HHS R01 DC017687NIMH NIH HHS R01 MH115697
6 · The paper itself

Abstract

Multivariate time series data appear often as realizations of non-stationary processes where the covariance matrix or spectral matrix smoothly evolve over time. Most of the current approaches estimate the time-varying spectral properties only retrospectively - that is, after the entire data has been observed. Retrospective estimation is a major limitation in many adaptive control applications where it is important to estimate these properties and detect changes in the system as they happen in real-time. To overcome this limitation, we develop an online estimation procedure that gives a real-time update of the time-varying parameters as new observations arrive. One approach to modeling non-stationary time series is to fit time-varying vector autoregressive models (tv-VAR). However, one major obstacle in online estimation of such models is the computational cost due to the high-dimensionality of the parameters. Existing methods such as the Kalman filter or local least squares are feasible. However, they are not always suitable because they provide noisy estimates and can become prohibitively costly as the dimension of the time series increases. In our brain signal application, it is critical to develop a robust method that can estimate, in real-time, the properties of the underlying stochastic process, in particular, the spectral brain connectivity measures. For these reasons we propose a new smooth online parameter estimation approach (SOPE) that has the ability to control for the smoothness of the estimates with a reasonable computational complexity. Consequently, the models are fit in real-time even for high dimensional time series. We demonstrate that our proposed SOPE approach is as good as the Kalman filter in terms of mean-squared error for small dimensions. However, unlike the Kalman filter, the SOPE has lower computational cost and hence scalable for higher dimensions. Finally, we apply the SOPE method to local field potential activity data from the hippocampus of a rat performing an odor sequence memory task. As demonstrated in the video, the proposed SOPE method is able to capture the dynamics of the connectivity as the rat samples the different odor stimuli.

Indexed as

Dynamic brain connectivityDynamic spectral connectivityLocally stationary processesOnline parameter estimation

Identifiers

PMID40270583
PMCPMC12015553

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.