Evidence map›Paper›PMID 40269942›Full record

ArticleBMC research notes2025

Comprehensive single-cell RNA-sequencing study of Tollip deficiency effect in IL-13-stimulated human airway epithelial cells.

Grace Yihua Lee, Niccolette Schaunaman, Hamid Reza Nouri, Monica Kraft, Hong Wei Chu

Abstract read
In one paragraph

Article in BMC research notes, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

5 authors.

Grace Yihua LeeSingulomics Corporation, Bronx, NY, USA.
Niccolette SchaunamanDepartment of Medicine, National Jewish Health, Denver, CO, USA.
Hamid Reza NouriDepartment of Medicine, National Jewish Health, Denver, CO, USA.
Monica KraftDepartment of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Hong Wei ChuDepartment of Medicine, National Jewish Health, Denver, CO, USA. ChuH@njhealth.org.

Funding

Tollip inhibits IL-33 signaling during airway influenza virus infectionU19AI125357 · NIAID · UNIVERSITY OF ARIZONA · PI KRAFT, MONICA, VERCELLI, DONATA · 2016 to 2025
$14.7M
NIAID NIH HHS U19 AI125357NIH HHS U19AI125357
6 · The paper itself

Abstract

objectiveToll-interacting protein (Tollip) suppresses excessive pro-inflammatory signaling, but its function in airway epithelial responses to IL-13, a key mediator in allergic diseases, remains unclear. This study investigates Tollip knockdown (TKD) effects in primary human airway epithelial cells using single-cell RNA sequencing, providing the first single-cell analysis of TKD and the first exploring its interaction with IL-13.

resultsIL-13 treatment upregulated key genes, including SPDEF, MUC5AC, POSTN, ALOX15, and CCL26, confirming IL-13's effects and validating our methods. IL-13 reduced TNF-α signaling and epithelial-mesenchymal transition in certain cell types, suggesting a dual role in promoting type 2 inflammation while suppressing Th1-driven inflammation. Tollip deficiency alone significantly amplified TNF-α signaling and inflammatory pathways in goblet, club, and suprabasal cells. Comparisons between TKDIL13 vs IL13 and TKD vs CTR revealed that IL-13 does not substantially alter Tollip deficiency response in most cell types, reinforcing findings in TKD vs CTR. Tollip deficiency alters the response to IL-13 in a cell-type-specific manner, strongly downregulating TNF-α signaling in goblet cells but only weakly in basal and club cells. Tollip deficiency enhances IL-13's suppression of Th1 inflammatory responses in goblet cells. These novel insights in Tollip-IL-13 interactions offer potential therapeutic targets for asthma and related diseases.

Indexed as

Epithelial CellsInterleukin-13Intracellular Signaling Peptides and ProteinsRespiratory MucosaSingle-Cell AnalysisCells, CulturedEpithelial-Mesenchymal TransitionGene Knockdown TechniquesHumansInflammationSequence Analysis, RNASignal TransductionTumor Necrosis Factor-alphaIL13 protein, humanInterleukin-13Intracellular Signaling Peptides and ProteinsTOLLIP protein, humanTumor Necrosis Factor-alphaBasal cellsEpithelial–mesenchymal transitionIL13 or IL-13Inflammatory responsescRNA-seqTNF-α signalingTollip

Identifiers

PMID40269942
PMCPMC12020103

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.