Evidence map›Paper›PMID 40267969›Full record

ArticleNature medicine2025

Comparative benchmarking of the DeepSeek large language model on medical tasks and clinical reasoning.

Mickael Tordjman, Zelong Liu, Murat Yuce, Valentin Fauveau, Yunhao Mei, Jerome Hadjadj, Ian Bolger, Haidara Almansour, Carolyn Horst, Ashwin Singh Parihar and 13 more

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Nature medicine, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 115 papers.

0numbers the graph read from it
0cells of the map it votes in
115citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

115 citing papers in PubMed.

  1. Article
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  5. [Application effect of LLMs as decision-support tools in emergency burn treatment].Zhonghua shao shang yu chuang mian xiu fu za zhi · 2026
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  20. Article

55 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors.

Mickael Tordjman *BioMedical Engineering and Imaging Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Zelong Liu *BioMedical Engineering and Imaging Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0000-0001-6968-6467
Murat YuceBioMedical Engineering and Imaging Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0000-0003-0619-5868
Valentin FauveauBioMedical Engineering and Imaging Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Yunhao MeiErasmus University Rotterdam, Rotterdam, the Netherlands.
Jerome HadjadjSorbonne Universite, Service de Medecine Interne, Hopital Saint Antoine, AP-HP, Paris, France.
Ian BolgerBioMedical Engineering and Imaging Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0009-0008-8205-7209
Haidara AlmansourDepartment of Diagnostic and Interventional Radiology, Tuebingen University Hospital, Tuebingen, Germany.
Carolyn HorstSchool of Biomedical Engineering and Imaging Sciences, King's College London, London, UK.ORCID http://orcid.org/0000-0003-2427-6610
Ashwin Singh PariharMallinckrodt Institute of Radiology, Washington University School of Medicine, Saint Louis, MO, USA.ORCID http://orcid.org/0000-0002-7983-4117
Amine GeahchanBioMedical Engineering and Imaging Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0009-0008-1924-866X
Anis MeriboutBioMedical Engineering and Imaging Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0009-0001-7346-4258
Nader YatimDepartment of Immunology and Immunotherapy, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Nicole NgDepartment of Pulmonary, Critical Care and Sleep Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Phillip RobsonBioMedical Engineering and Imaging Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Alexander ZhouBioMedical Engineering and Imaging Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0009-0007-1292-2765
Sara LewisBioMedical Engineering and Imaging Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Mingqian HuangBioMedical Engineering and Imaging Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.
Timothy DeyerEast River Medical Imaging, New York, NY, USA.
Bachir TaouliBioMedical Engineering and Imaging Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID http://orcid.org/0000-0001-6409-1333
Hao-Chih LeeBioMedical Engineering and Imaging Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA. hao-chih.lee@mssm.edu.ORCID http://orcid.org/0000-0002-1538-6175
Zahi A FayadBioMedical Engineering and Imaging Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA. zahi.fayad@mssm.edu.ORCID http://orcid.org/0000-0002-3439-7347
Xueyan MeiBioMedical Engineering and Imaging Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA. xueyan.mei@mssm.edu.ORCID http://orcid.org/0000-0001-7224-7318

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DeepSeek is a newly introduced large language model (LLM) designed for enhanced reasoning, but its medical-domain capabilities have not yet been evaluated. Here we assessed the capabilities of three LLMs- DeepSeek-R1, ChatGPT-o1 and Llama 3.1-405B-in performing four different medical tasks: answering questions from the United States Medical Licensing Examination (USMLE), interpreting and reasoning on the basis of text-based diagnostic and management cases, providing tumor classification according to RECIST 1.1 criteria and providing summaries of diagnostic imaging reports across multiple modalities. In the USMLE test, the performance of DeepSeek-R1 (accuracy 0.92) was slightly inferior to that of ChatGPT-o1 (accuracy 0.95; P = 0.04) but better than that of Llama 3.1-405B (accuracy 0.83; P < 10

Indexed as

BenchmarkingClinical ReasoningHumansLanguageLarge Language ModelsUnited States

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.