Evidence map›Paper›PMID 40266283›Full record

ArticleNucleic acids research2025

MSTmap Online: enhanced usability, visualization, and accessibility.

Amirsadra Mohseni, Stefano Lonardi

Abstract read
In one paragraph

Article in Nucleic acids research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Amirsadra MohseniComputer Science and Engineering, University of California, Riverside, CA 92521, United States.ORCID 0000-0003-0735-6846
Stefano LonardiComputer Science and Engineering, University of California, Riverside, CA 92521, United States.ORCID 0000-0002-2696-7274

Funding

Rapid response for pandemics: single cell sequencing and deep learning to predict antibody sequences against an emerging antigenR01AI169543 · NIAID · KECK GRADUATE INST OF APPLIED LIFE SCIS · PI HERNANDEZ, JENIFFER BERTHA, LONARDI, STEFANO · 2021 to 2023
$3.1M
National Science Foundation CBET-2225878National Science Foundation DBI-0321756National Science Foundation IIS-244456NIAID NIH HHS R01 AI169543US National Institutes of Health 1R01AI169543-01
6 · The paper itself

Abstract

Genetic linkage maps are an essential tool in population genetics and plant breeding research, yet user-friendly online tools for constructing and visualizing them remain scarce. MSTmap Online addresses this gap by providing a modern, accessible platform for generating high-quality genetic linkage maps from genotypic data. The web server quickly computes linkage groups using the MSTmap algorithm and generates detailed output files, including publication-ready PDF visualizations of linkage groups. The server supports bookmarking and asynchronous processing, allowing users to revisit their results at a later time. A companion Python library for MSTmap Online enables seamless integration into custom analysis pipelines. MSTmap Online is free and open to all users with no login requirement at https://mstmap.org. The companion Python library is available at https://pypi.org/project/mstmap/.

Indexed as

Chromosome MappingGenetic LinkageSoftwareAlgorithmsGenotypeInternetUser-Computer Interface

Identifiers

PMID40266283
PMCPMC12230655

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.