Evidence map›Paper›PMID 40265030›Full record

ArticleFrontiers in oncology2025

5hmC-profiles in Puerto Rican Hispanic/Latino men with aggressive prostate cancer.

Manishkumar S Patel, Mousa Almubarak, Jaime Matta, Carmen Ortiz-Sanchez, Jarline Encarnacion, Gilberto Ruiz-Deya, Julie Dutil, Jasreman Dhillon, Kosj Yamoah, Anders Berglund and 5 more

Abstract read
In one paragraph

Article in Frontiers in oncology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors.

Manishkumar S PatelDepartment of Tumor Microenvironment and Metastasis, H. Lee Moffitt Cancer Center and Research Institute, Tampa, FL, United States.
Mousa AlmubarakDepartment of Tumor Microenvironment and Metastasis, H. Lee Moffitt Cancer Center and Research Institute, Tampa, FL, United States.
Jaime MattaDepartment of Basic Sciences, Ponce Research Institute, Ponce Health Sciences University-School of Medicine, Ponce, Puerto Rico.
Carmen Ortiz-SanchezDepartment of Basic Sciences, Ponce Research Institute, Ponce Health Sciences University-School of Medicine, Ponce, Puerto Rico.
Jarline EncarnacionDepartment of Basic Sciences, Ponce Research Institute, Ponce Health Sciences University-School of Medicine, Ponce, Puerto Rico.
Gilberto Ruiz-DeyaDepartment of Basic Sciences, Ponce Research Institute, Ponce Health Sciences University-School of Medicine, Ponce, Puerto Rico.
Julie DutilDepartment of Basic Sciences, Ponce Research Institute, Ponce Health Sciences University-School of Medicine, Ponce, Puerto Rico.
Jasreman DhillonDepartment of Pathology, H. Lee Moffitt Cancer Center and Research Institute, Tampa, FL, United States.
Kosj YamoahDepartment of Radiation Oncology, H. Lee Moffitt Cancer Center and Research Institute, Tampa, FL, United States.
Anders BerglundDepartment of Biostatistics and Bioinformatics, H. Lee Moffitt Cancer Center and Research Institute, Tampa, FL, United States.
Hyun ParkDepartment of Cancer Epidemiology, H. Lee Moffitt Cancer Center and Research Institute, Tampa, FL, United States.
Deepak KilariDivision of Oncology, Medical College of Wisconsin, Milwaukee, WI, United States.
Yoganand BalagurunathanDepartment of Machine Learning, H. Lee Moffitt Cancer Center and Research Institute, Tampa, FL, United States.
Liang Wang *Department of Tumor Microenvironment and Metastasis, H. Lee Moffitt Cancer Center and Research Institute, Tampa, FL, United States.
Jong Y Park *Department of Cancer Epidemiology, H. Lee Moffitt Cancer Center and Research Institute, Tampa, FL, United States.

Funding

TRANSLATIONAL RESEARCHP30CA076292 · NCI · UNIVERSITY OF SOUTH FLORIDA · PI KENNETH Lynn WRIGHT · 1998 to 2026
$93.5M
Using MC1R genotype to impact skin cancer risk behaviors in Hispanics/LatinosU54CA163068 · NCI · H. LEE MOFFITT CANCER CTR & RES INST · PI KENNETH Lynn WRIGHT · 2012 to 2026
$23.1M
Using MC1R genotype to impact skin cancer risk behaviors in Hispanics/LatinosU54CA163071 · NCI · PONCE SCHOOL OF MEDICINE · PI Luisa Morales-Torres · 2012 to 2026
$23.0M
Cell free nucleic acid-based biomarkers in advanced prostate cancerR01CA212097 · NCI · MEDICAL COLLEGE OF WISCONSIN · PI KOHLI, MANISH, WANG, LIANG · 2017 to 2022
$3.1M
Functional characterization of prostate cancer risk loci by high throughput sequencingR01CA250018 · NCI · H. LEE MOFFITT CANCER CTR & RES INST · PI WANG, LIANG · 2020 to 2023
$1.5M
NCI NIH HHS P30 CA076292NCI NIH HHS R01 CA212097NCI NIH HHS R01 CA250018NCI NIH HHS U54 CA163068NCI NIH HHS U54 CA163071
6 · The paper itself

Abstract

Introduction: Puerto Rican (PR) Hispanic/Latino (H/L) men are an understudied population that has the highest prostate cancer (PCa) specific mortality among other Hispanic populations. Little information is known about the higher mortality in PR H/L men. It is thought that epigenetic changes in key genes may play a critical role in aggressive tumors. Methods: We aimed to identify key 5-hydroxymethylcytosine (5hmC) changes in PR H/L men with aggressive PCa. We performed sequencing analysis using the 5hmC-enriched DNA from 22 prostate tumors and 24 adjacent normal FFPE samples. Results: We identified 808 differentially methylated genes (DMGs) in tumors compared to adjacent normal tissues. These genes suggest key mechanisms, including upregulated signatures of negative Androgen Receptor (AR) regulation, Wnt/β-catenin pathway activation, and downregulation of tumor suppressor genes. Pathway analysis of DMGs demonstrated that DNA repair pathway was most upregulated in tumors. Since 5hmC abundance positively correlates with gene expression levels, we further investigated 808 DMGs in TCGA PCa gene expression data. Further, we identified 59 DMGs with significant gene expression changes in the same direction. Additionally, we identified 111 aggressiveness-related DMGs, of which, two hypomethylated genes ( Discussion: The 5hmC modifications and associated gene expression changes in these six genes could be linked to the highest prostate cancer (PCa)-specific mortality in PR H/L men. In conclusion, our study identified 59 DMGs showing concordant epigenetic and transcriptomic changes in tumor tissues and 111 DMGs showing association with aggressive PCa among PR H/L men. Our findings have significant implications for understanding these key genes' molecular mechanisms, which may drive PCa progression and mortality in this population. This will help in developing potential biomarkers or therapeutic targets for personalized treatment strategies in this high-risk subgroup. Future research will explore how these genes contribute to PCa-specific mortality through molecular analyses, with plans to validate them in a larger validation cohort.

Indexed as

5hmCaggressivenessDNA methylationprostate cancerPuerto Rican Hispanic/Latino

Identifiers

PMID40265030
PMCPMC12011585

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.