Evidence map›Paper›PMID 40263935›Full record

ArticleMolecular therapy : the journal of the American Society of Gene Therapy2025

Identification of a robust promoter in mouse and human hepatocytes by in vivo biopanning of a barcoded AAV library.

Jonas Becker, Claire Domenger, Pervinder Choksi, Chiara Krämer, Conradin Baumgartl, Olena Maiakovska, Jae-Jun Kim, Jonas Weinmann, Georg Huber, Florian Schmidt and 4 more

Abstract read
In one paragraph

Article in Molecular therapy : the journal of the American Society of Gene Therapy, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Distinct YY dinucleotide periodicity in adeno-associated virus DNA.Molecular therapy : the journal of the American Society of Gene Therapy · 2026
    Article
  2. Article
  3. Review
  4. Article
  5. Amplified genome editing bybioRxiv : the preprint server for biology · 2026
    Article
  6. Review
  7. Article
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Jonas BeckerDepartment of Infectious Diseases/Virology, Section Viral Vector Technologies, Medical Faculty, University of Heidelberg, 69120 Heidelberg, Germany; BioQuant, Center for Integrative Infectious Diseases (CIID), University of Heidelberg, 69120 Heidelberg, Germany.
Claire DomengerDepartment of Infectious Diseases/Virology, Section Viral Vector Technologies, Medical Faculty, University of Heidelberg, 69120 Heidelberg, Germany; BioQuant, Center for Integrative Infectious Diseases (CIID), University of Heidelberg, 69120 Heidelberg, Germany.
Pervinder ChoksiDepartment of Surgery, Eli and Edythe Broad Center of Regeneration Medicine and Stem Cell Research, University of California, San Francisco (UCSF), San Francisco, CA, USA.
Chiara KrämerDepartment of Infectious Diseases/Virology, Section Viral Vector Technologies, Medical Faculty, University of Heidelberg, 69120 Heidelberg, Germany; BioQuant, Center for Integrative Infectious Diseases (CIID), University of Heidelberg, 69120 Heidelberg, Germany.
Conradin BaumgartlDepartment of Infectious Diseases/Virology, Section Viral Vector Technologies, Medical Faculty, University of Heidelberg, 69120 Heidelberg, Germany; BioQuant, Center for Integrative Infectious Diseases (CIID), University of Heidelberg, 69120 Heidelberg, Germany.
Olena MaiakovskaDepartment of Infectious Diseases/Virology, Section Viral Vector Technologies, Medical Faculty, University of Heidelberg, 69120 Heidelberg, Germany; BioQuant, Center for Integrative Infectious Diseases (CIID), University of Heidelberg, 69120 Heidelberg, Germany.
Jae-Jun KimDepartment of Surgery, Eli and Edythe Broad Center of Regeneration Medicine and Stem Cell Research, University of California, San Francisco (UCSF), San Francisco, CA, USA.
Jonas WeinmannDepartment of Infectious Diseases/Virology, Section Viral Vector Technologies, Medical Faculty, University of Heidelberg, 69120 Heidelberg, Germany; BioQuant, Center for Integrative Infectious Diseases (CIID), University of Heidelberg, 69120 Heidelberg, Germany.
Georg HuberRevvity Gene Delivery GmbH, 82166 Gräfelfing, Germany.
Florian SchmidtDepartment of Infectious Diseases/Virology, Section Viral Vector Technologies, Medical Faculty, University of Heidelberg, 69120 Heidelberg, Germany; BioQuant, Center for Integrative Infectious Diseases (CIID), University of Heidelberg, 69120 Heidelberg, Germany.
Christian ThirionRevvity Gene Delivery GmbH, 82166 Gräfelfing, Germany.
Oliver J MüllerDepartment of Internal Medicine V, University Hospital Schleswig-Holstein and University of Kiel, 24105 Kiel, Germany; German Centre for Cardiovascular Research (DZHK), partner site Hamburg/Kiel/Lübeck, 24105 Kiel, Germany.
Holger WillenbringDepartment of Surgery, Eli and Edythe Broad Center of Regeneration Medicine and Stem Cell Research, University of California, San Francisco (UCSF), San Francisco, CA, USA.
Dirk GrimmDepartment of Infectious Diseases/Virology, Section Viral Vector Technologies, Medical Faculty, University of Heidelberg, 69120 Heidelberg, Germany; BioQuant, Center for Integrative Infectious Diseases (CIID), University of Heidelberg, 69120 Heidelberg, Germany; German Center for Infection Research (DZIF) and German Center for Cardiovascular Research (DZHK), partner site Heidelberg, 69120 Heidelberg, Germany; Faculty of Engineering Sciences, University of Heidelberg, 69120 Heidelberg, Germany. Electronic address: dirk.grimm@bioquant.uni-heidelberg.de.

Funding

UCSF Liver Core CenterP30DK026743 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Holger Willenbring · 1986 to 2026
$30.7M
Targeting AAV vectors to cell types involved in alcohol-induced liver injuryR01AA026578 · NIAAA · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI WILLENBRING, HOLGER · 2018 to 2022
$1.7M
NIAAA NIH HHS R01 AA026578NIDDK NIH HHS P30 DK026743
6 · The paper itself

Abstract

Recombinant adeno-associated viruses (AAVs) are leading vectors for in vivo human gene therapy. An integral vector element is promoters, which control transgene expression in either a ubiquitous or cell-type-selective manner. Identifying optimal capsid-promoter combinations is challenging, especially when considering on- versus off-target expression. Here, we report a pipeline for in vivo promoter biopanning in AAV building on our AAV capsid barcoding technology and illustrate its potential by screening 53 promoters in 16 murine tissues using an AAV9 vector. Surprisingly, the 2.2-kb human glial fibrillary acidic protein (GFAP) promoter was the top hit in the liver, where it outperformed robust benchmarks such as the human α-1-antitrypsin promoter or the clinically used liver-specific promoter 1 (LP1). Analysis of hepatic cell populations revealed preferred GFAP promoter activity in hepatocytes. Notably, the GFAP promoter also surpassed the LP1 and cytomegalovirus promoters in human hepatocytes engrafted in an immune-deficient mouse. These findings establish the GFAP promoter as an exciting alternative for research and clinical applications requiring efficient and specific transgene expression in hepatocytes. Our pipeline expands the arsenal of technologies for high-throughput in vivo screening of viral vector components and is compatible with capsid barcoding, facilitating the combinatorial interrogation of complex AAV libraries.

Indexed as

DependovirusGenetic VectorsHepatocytesPromoter Regions, GeneticAnimalsGene ExpressionGene LibraryGenetic TherapyGlial Fibrillary Acidic ProteinHumansMiceTransgenesGlial Fibrillary Acidic ProteinAAVadeno-associated virusbarcodeGFAPlibrarypromoter

Identifiers

PMID40263935
PMCPMC12443165

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.