Evidence map›Paper›PMID 40263584›Full record

ArticleNature methods2025

TEMI: tissue-expansion mass-spectrometry imaging.

Hua Zhang, Lang Ding, Amy Hu, Xudong Shi, Penghsuan Huang, Haiyan Lu, Paul W Tillberg, Meng C Wang, Lingjun Li

Abstract read
In one paragraph

Article in Nature methods, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Review
  8. PLANCK: super-multiplex optical imaging without labeling.bioRxiv : the preprint server for biology · 2026
    Article
  9. Review
  10. Living single-cell metabolomicsChemical science · 2026
    Review
  11. Review
  12. Review
  13. Single-Cell Protein Assays in Context: From 2D to 3D and In Situ Analysis.Annual review of analytical chemistry (Palo Alto, Calif.) · 2026
    Review
  14. Article
  15. Article
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  19. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors.

Hua Zhang *School of Pharmacy, University of Wisconsin-Madison, Madison, WI, USA.ORCID http://orcid.org/0000-0003-2875-7243
Lang Ding *Howard Hughes Medical Institute, Janelia Research Campus, Ashburn, VA, USA.
Amy HuHoward Hughes Medical Institute, Janelia Research Campus, Ashburn, VA, USA.
Xudong ShiDivision of Otolaryngology, Department of Surgery, School of Medicine and Public Health, University of Wisconsin-Madison, Madison, WI, USA.
Penghsuan HuangDepartment of Chemistry, University of Wisconsin-Madison, Madison, WI, USA.ORCID http://orcid.org/0000-0002-5058-5399
Haiyan LuSchool of Pharmacy, University of Wisconsin-Madison, Madison, WI, USA.
Paul W TillbergHoward Hughes Medical Institute, Janelia Research Campus, Ashburn, VA, USA. tillbergp@janelia.hhmi.org.ORCID http://orcid.org/0000-0002-2568-2365
Meng C WangHoward Hughes Medical Institute, Janelia Research Campus, Ashburn, VA, USA. mengwang@janelia.hhmi.org.ORCID http://orcid.org/0000-0002-5898-6007
Lingjun LiSchool of Pharmacy, University of Wisconsin-Madison, Madison, WI, USA. lingjun.li@wisc.edu.ORCID http://orcid.org/0000-0003-0056-3869

Funding

WU P&FP30DK020579 · NIDDK · WASHINGTON UNIVERSITY · PI Jennifer Lynn Powers Carson · 2013 to 2026
$27.1M
Radionuclide Production and Radiochemistry Core Description CoreP01CA250972 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI BEDNARZ, BRYAN PATRICK · 2020 to 2024
$12.5M
Mass Spectrometric Studies of Neuropeptides in FeedingR01DK071801 · NIDDK · UNIVERSITY OF WISCONSIN-MADISON · PI LINGJUN LI · 2006 to 2026
$6.7M
Decode the chemical language that orchestrates cellular and organismal homeostasisDP1DK113644 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI WANG, MENG CARLA · 2016 to 2020
$5.5M
Creating a region- specific biomolecular atlas of the brain of Alzheimer’s diseaseR01AG078794 · NIA · UNIVERSITY OF WISCONSIN-MADISON · PI LINGJUN LI, Luigi Puglielli · 2022 to 2026
$3.7M
DiLeu-enabled multiplexed quantitation for biomarker discovery and validation in Alzheimer’s diseaseR01AG052324 · NIA · UNIVERSITY OF WISCONSIN-MADISON · PI LINGJUN LI · 2023 to 2026
$2.3M
Acquisition of a High-Field Dual Source FTICR-MS for Pharmaceutical ResearchS10RR029531 · NCRR · UNIVERSITY OF WISCONSIN-MADISON · PI LI, LINGJUN · 2011 to 2011
$2.1M
Acquisition of a Dual-Source, High-Performance, Ion Mobility, Quadrupole Time-of-Flight Mass Spectrometry System for Biomedical Research at UW-MadisonS10OD028473 · OD · UNIVERSITY OF WISCONSIN-MADISON · PI LI, LINGJUN · 2021 to 2021
$1.3M
Acquisition of a High Resolution High Speed MALDI Mass Spectrometer for Biomedical Research at UW-MadisonS10OD025084 · OD · UNIVERSITY OF WISCONSIN-MADISON · PI LI, LINGJUN · 2018 to 2018
$598k
NCI NIH HHS P01 CA250972NCRR NIH HHS S10 RR029531NIA NIH HHS R01 AG052324NIA NIH HHS R01 AG078794NIDDK NIH HHS DP1 DK113644NIDDK NIH HHS P30 DK020579NIDDK NIH HHS R01 DK071801NIH HHS S10 OD025084NIH HHS S10 OD028473ODCDC CDC HHS S10 OD028473U.S. Department of Health & Human Services | National Institutes of Health (NIH) DP1DK113644U.S. Department of Health & Human Services | National Institutes of Health (NIH) R01 AG078794, R01 DK071801, R01 AG052324
6 · The paper itself

Abstract

The spatial distribution of diverse biomolecules in multicellular organisms is essential for their physiological functions. High-throughput in situ mapping of biomolecules is crucial for both basic and medical research, and requires high scanning speed, spatial resolution, and chemical sensitivity. Here we developed a tissue-expansion method compatible with matrix-assisted laser desorption/ionization mass-spectrometry imaging (TEMI). TEMI reaches single-cell spatial resolution without sacrificing voxel throughput and enables the profiling of hundreds of biomolecules, including lipids, metabolites, peptides (proteins), and N-glycans. Using TEMI, we mapped the spatial distribution of biomolecules across various mammalian tissues and uncovered metabolic heterogeneity in tumors. TEMI can be easily adapted and broadly applied in biological and medical research, to advance spatial multi-omics profiling.

Indexed as

Spectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationAnimalsHumansMiceSingle-Cell Analysis

Identifiers

PMID40263584
PMCPMC12074994

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.