Evidence map›Paper›PMID 40261964›Full record

ArticleThe Plant cell2025

The protein kinases KIPK and KIPK-LIKE1 suppress overbending during negative hypocotyl gravitropic growth in Arabidopsis.

Yao Xiao, Melina Zourelidou, Alkistis E Lanassa Bassukas, Benjamin Weller, Dorina P Janacek, Jan Šimura, Karin Ljung, Ulrich Z Hammes, Jia Li, Claus Schwechheimer

Abstract read
In one paragraph

Article in The Plant cell, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Split-YFP-coupled interaction-dependent TurboID identifies new functions of basal cell polarity inProceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Yao XiaoPlant Systems Biology, School of Life Sciences, Technical University of Munich, Emil-Ramann-Strasse 8, Freising 85354, Germany.ORCID 0000-0002-3078-7225
Melina ZourelidouPlant Systems Biology, School of Life Sciences, Technical University of Munich, Emil-Ramann-Strasse 8, Freising 85354, Germany.ORCID 0000-0001-5218-4583
Alkistis E Lanassa BassukasPlant Systems Biology, School of Life Sciences, Technical University of Munich, Emil-Ramann-Strasse 8, Freising 85354, Germany.ORCID 0000-0002-3506-8537
Benjamin WellerPlant Systems Biology, School of Life Sciences, Technical University of Munich, Emil-Ramann-Strasse 8, Freising 85354, Germany.ORCID 0000-0002-0231-595X
Dorina P JanacekPlant Systems Biology, School of Life Sciences, Technical University of Munich, Emil-Ramann-Strasse 8, Freising 85354, Germany.
Jan ŠimuraDepartment of Forest Genetics and Plant Physiology, Umeå Plant Science Centre, Swedish University of Agricultural Sciences, 90736 Umeå, Sweden.
Karin LjungDepartment of Forest Genetics and Plant Physiology, Umeå Plant Science Centre, Swedish University of Agricultural Sciences, 90736 Umeå, Sweden.ORCID 0000-0003-2901-189X
Ulrich Z HammesPlant Systems Biology, School of Life Sciences, Technical University of Munich, Emil-Ramann-Strasse 8, Freising 85354, Germany.ORCID 0000-0002-3663-4908
Jia LiGuangdong Provincial Key Laboratory of Plant Adaptation and Molecular Design, School of Life Sciences, Guangzhou University, Guangzhou 510006, China.
Claus SchwechheimerPlant Systems Biology, School of Life Sciences, Technical University of Munich, Emil-Ramann-Strasse 8, Freising 85354, Germany.ORCID 0000-0003-0269-2330

Funding

Alexander-von-Humboldt Foundation 1216207 HFST-PKnut and Alice Wallenberg Foundation KAW 2016.0352National Natural Science Foundation of China 32400287Swedish Research Council VR 2021-04938
6 · The paper itself

Abstract

Plants use environmental cues to orient organ and plant growth, such as the direction of gravity or the direction, quantity, and quality of light. During the germination of Arabidopsis thaliana seeds in soil, negative gravitropism responses direct hypocotyl elongation such that the seedling can reach the light for photosynthesis and autotrophic growth. Similarly, hypocotyl elongation in the soil also requires mechanisms to efficiently grow around obstacles such as soil particles. Here, we identify KIPK (KINESIN-LIKE CALMODULIN-BINDING PROTEIN-INTERACTING PROTEIN KINASE) and the paralogous KIPKL1 (KIPK-LIKE1) as genetically redundant regulators of gravitropic hypocotyl bending. Moreover, we demonstrate that the homologous KIPKL2 (KIPK-LIKE2), which shows strong sequence similarity, must be functionally distinct. KIPK and KIPKL1 are polarly localized plasma membrane-associated proteins that can activate PIN-FORMED auxin transporters. KIPK and KIPKL1 are required to efficiently align hypocotyl growth with the gravity vector when seedling hypocotyls are grown on media plates or in soil, where contact with soil particles and obstacle avoidance impede direct negative gravitropic growth. Therefore, the polar KIPK and KIPKL1 kinases have different biological functions from the related AGC1 family kinases D6PK (D6 PROTEIN KINASE) or PAX (PROTEIN KINASE ASSOCIATED WITH BRX).

Indexed as

ArabidopsisArabidopsis ProteinsGravitropismHypocotylProtein KinasesProtein Serine-Threonine KinasesGene Expression Regulation, PlantIndoleacetic AcidsSeedlingsArabidopsis ProteinsIndoleacetic AcidsKIPKL1 protein ArabidopsisKIPK protein, ArabidopsisProtein KinasesProtein Serine-Threonine Kinases

Identifiers

PMID40261964
PMCPMC12013712

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.