Evidence map›Paper›PMID 40260151›Full record

ArticleEcology and evolution2025

Protein Coding Low-Copy

Vasilii Shapkin, Miroslav Caboň, Miroslav Kolařík, Katarína Adamčíková, Petr Baldrian, Tereza Michalková, Tomáš Větrovský, Slavomír Adamčík

Erratum issuedAbstract read
In one paragraph

Article in Ecology and evolution, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. A Near-T2T Genome Assembly ofJournal of fungi (Basel, Switzerland) · 2026
    Article
  3. Article
  4. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors.

Vasilii ShapkinLaboratory of Molecular Ecology and Mycology Institute of Botany, Plant Science and Biodiversity Center, Slovak Academy of Sciences Bratislava Slovakia.ORCID https://orcid.org/0000-0002-8394-3009
Miroslav CaboňLaboratory of Molecular Ecology and Mycology Institute of Botany, Plant Science and Biodiversity Center, Slovak Academy of Sciences Bratislava Slovakia.ORCID https://orcid.org/0000-0002-2255-3816
Miroslav KolaříkInstitute of Microbiology, Academy of Sciences of the Czech Republic Prague Czech Republic.ORCID https://orcid.org/0000-0003-4016-0335
Katarína AdamčíkováDepartment of Plant Pathology and Mycology Institute of Forest Ecology, Slovak Academy of Sciences Zvolen Nitra Slovakia.ORCID https://orcid.org/0000-0001-5407-5233
Petr BaldrianInstitute of Microbiology, Academy of Sciences of the Czech Republic Prague Czech Republic.ORCID https://orcid.org/0000-0002-8983-2721
Tereza MichalkováInstitute of Microbiology, Academy of Sciences of the Czech Republic Prague Czech Republic.ORCID https://orcid.org/0000-0003-2271-6408
Tomáš VětrovskýInstitute of Microbiology, Academy of Sciences of the Czech Republic Prague Czech Republic.ORCID https://orcid.org/0000-0002-0831-486X
Slavomír AdamčíkLaboratory of Molecular Ecology and Mycology Institute of Botany, Plant Science and Biodiversity Center, Slovak Academy of Sciences Bratislava Slovakia.ORCID https://orcid.org/0000-0003-2156-5767

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The nuclear ribosomal DNA Internal Transcribed Spacer (ITS) region is used as a universal fungal barcode marker, but often lacks a significant DNA barcoding gap between sister taxa. Here we tested the reliability of protein coding low-copy genes as alternative barcode markers. Mock communities of three unrelated agaric genera (

Indexed as

amplicon abundancechimerasympatric speciesthreshold

Identifiers

PMID40260151
PMCPMC12011493

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.