Evidence map›Paper›PMID 40259418›Full record

ArticleJournal of cheminformatics2025

Prediction of the water solubility by a graph convolutional-based neural network on a highly curated dataset.

Nadin Ulrich, Karsten Voigt, Anton Kudria, Alexander Böhme, Ralf-Uwe Ebert

Abstract read
In one paragraph

Article in Journal of cheminformatics, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Nadin UlrichDepartment of Exposure Science, Helmholtz Centre for Environmental Research-UFZ, Permoserstrasse 15, 04318, Leipzig, Germany. nadin.ulrich@ufz.de.
Karsten VoigtPAULY, Theresienstrasse 50, 04129, Leipzig, Germany.
Anton KudriaDepartment of Exposure Science, Helmholtz Centre for Environmental Research-UFZ, Permoserstrasse 15, 04318, Leipzig, Germany.
Alexander BöhmeDepartment of Exposure Science, Helmholtz Centre for Environmental Research-UFZ, Permoserstrasse 15, 04318, Leipzig, Germany.
Ralf-Uwe EbertDepartment of Exposure Science, Helmholtz Centre for Environmental Research-UFZ, Permoserstrasse 15, 04318, Leipzig, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Water solubility is a relevant physico-chemcial property in environmental chemistry, toxicology, and drug design. Although the water solubility is besides the octanol-water partition coefficient, melting point, and boiling point a property with a large amount of available experimental data, there are still more compounds in the chemical universe for which information on their water solubility is lacking. Thus, prediction tools with a broad application domain are needed to fill the corresponding data gaps. To this end, we developed a graph convolutional neural network model (GNN) to predict the water solubility in the form of log S

Indexed as

Machine learningNeural networksPhysico-chemical property predictionWater solubility

Identifiers

PMID40259418
PMCPMC12012962

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.