Evidence map›Paper›PMID 40258065›Full record

ArticlePloS one2025

Exploring similarity patterns in a large scientific corpus.

Daniel Witschard, Ilir Jusufi, Kostiantyn Kucher, Andreas Kerren

Abstract read
In one paragraph

Article in PloS one, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Daniel WitschardDepartment of Computer Science and Media Technology, Linnaeus University, Växjö, Sweden.ORCID 0000-0001-6150-0787
Ilir JusufiDepartment of Computer Science, Blekinge Institute of Technology, Karlskrona, Sweden.ORCID 0000-0001-6745-4398
Kostiantyn KucherDepartment of Science and Technology, Linköping University, Norrköping, Sweden.ORCID 0000-0002-1907-7820
Andreas KerrenDepartment of Computer Science and Media Technology, Linnaeus University, Växjö, Sweden.ORCID 0000-0002-0519-2537

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Similarity-based analysis is a common and intuitive tool for exploring large data sets. For instance, grouping data items by their level of similarity, regarding one or several chosen aspects, can reveal patterns and relations from the intrinsic structure of the data and thus provide important insights in the sense-making process. Existing analytical methods (such as clustering and dimensionality reduction) tend to target questions such as "Which objects are similar?"; but since they are not necessarily well-suited to answer questions such as "How does the result change if we change the similarity criteria?" or "How are the items linked together by the similarity relations?" they do not unlock the full potential of similarity-based analysis-and here we see a gap to fill. In this paper, we propose that the concept of similarity could be regarded as both: (1) a relation between items, and (2) a property in its own, with a specific distribution over the data set. Based on this approach, we developed an embedding-based computational pipeline together with a prototype visual analytics tool which allows the user to perform similarity-based exploration of a large set of scientific publications. To demonstrate the potential of our method, we present two different use cases, and we also discuss the strengths and limitations of our approach.

Indexed as

BibliometricsAlgorithmsCluster AnalysisDatasets as Topic

Identifiers

PMID40258065
PMCPMC12011216

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.