Evidence map›Paper›PMID 40253417›Full record

ArticleNature communications2025

A hollow TFG condensate spatially compartmentalizes the early secretory pathway.

Savannah M Bogus, William R Wegeng, Miguel Ruiz, Sindy R Chavez, Samantha N Cheung, Khalid S M Noori, Ingrid R Niesman, Andreas M Ernst

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Review
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  10. Organizing principles underlying COPII-mediated transport.Current opinion in cell biology · 2025
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors.

Savannah M Bogus *Department of Cell and Developmental Biology, School of Biological Sciences, University of California San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0009-0008-3355-2203
William R Wegeng *Department of Cell and Developmental Biology, School of Biological Sciences, University of California San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0009-0002-8255-4666
Miguel RuizDepartment of Cell and Developmental Biology, School of Biological Sciences, University of California San Diego, La Jolla, CA, USA.
Sindy R ChavezDepartment of Cell and Developmental Biology, School of Biological Sciences, University of California San Diego, La Jolla, CA, USA.
Samantha N CheungDepartment of Cell and Developmental Biology, School of Biological Sciences, University of California San Diego, La Jolla, CA, USA.ORCID http://orcid.org/0009-0007-3156-9506
Khalid S M NooriDepartment of Cell and Developmental Biology, School of Biological Sciences, University of California San Diego, La Jolla, CA, USA.
Ingrid R NiesmanDepartment of Biology, San Diego State University, San Diego, CA, USA.ORCID http://orcid.org/0000-0001-9767-6629
Andreas M ErnstDepartment of Cell and Developmental Biology, School of Biological Sciences, University of California San Diego, La Jolla, CA, USA. aernst@ucsd.edu.ORCID http://orcid.org/0000-0001-7359-7184

Funding

Pathways in Biological Sciences Training ProgramT32GM133351 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Matthew Daugherty, Randolph Y. Hampton · 2020 to 2026
$9.9M
U of Calif, San Diego Neuroscience Microscopy ImagingP30NS047101 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI GLEESON, JOSEPH G, ZHENG, BINHAI · 2003 to 2022
$9.0M
Morphological Determinants of Intracellular Membrane CompartmentsR35GM142433 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Andreas Max Ernst · 2021 to 2026
$2.2M
Acquisition of an Orbitrap Elite with ETDS10OD021724 · OD · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI KOMIVES, ELIZABETH A. · 2016 to 2016
$600k
Synapt G2-S System with HXMS AutomationS10OD016234 · OD · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI KOMIVES, ELIZABETH A. · 2013 to 2013
$600k
NIGMS NIH HHS R35 GM142433NIGMS NIH HHS T32 GM133351NIH HHS S10 OD016234NIH HHS S10 OD021724NINDS NIH HHS P30 NS047101U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) R35GM142433
6 · The paper itself

Abstract

In the early secretory pathway, endoplasmic reticulum (ER) and Golgi membranes form a nearly spherical interface. In this ribosome-excluding zone, bidirectional transport of cargo coincides with a spatial segregation of anterograde and retrograde carriers by an unknown mechanism. We show that at physiological conditions, the Trk-fused gene (TFG) self-organizes to form a hollow, anisotropic condensate that matches the dimensions of the ER-Golgi interface and is dynamically regulated across the cell cycle. Regularly spaced hydrophobic residues in TFG control the condensation mechanism and result in a porous condensate surface. We find that TFG condensates act as a molecular sieve capable of allowing access of anterograde coats (COPII) to the condensate interior while restricting retrograde coats (COPI). We propose that a hollow TFG condensate structures the ER-Golgi interface to create a diffusion-limited space for anterograde transport. We further propose that TFG condensates optimize membrane flux by insulating secretory carriers in their lumen from retrograde carriers outside TFG cages.

Indexed as

Endoplasmic ReticulumGolgi ApparatusSecretory PathwayHeLa CellsHumansProtein Transport

Identifiers

PMID40253417
PMCPMC12009431

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.