Evidence map›Paper›PMID 40253407›Full record

ArticleNature communications2025

A vasculature-resident innate lymphoid cell population in mouse lungs.

Simon Shirley, Hiroshi Ichise, Vincenzo Di Natale, Jiacheng Jin, Christine Wu, Raymond Zou, Wanwei Zhang, Yinshan Fang, Yingyu Zhang, Miao Chen and 4 more

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. A pathogenic CD8⁺ TNature communications · 2026
    Article
  2. Article
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Simon ShirleyDepartment of Microbiology & Immunology, Columbia University Medical Center, New York, NY, USA.
Hiroshi IchiseLymphocyte Biology Section, Laboratory of Immune Systems Biology, National Institute of Allergy and Infectious Disease, National Institutes of Health, Bethesda, 20892, MD, USA.
Vincenzo Di NataleDepartment of Microbiology & Immunology, Columbia University Medical Center, New York, NY, USA.
Jiacheng JinDepartment of Microbiology & Immunology, Columbia University Medical Center, New York, NY, USA.
Christine WuDepartment of Microbiology & Immunology, Columbia University Medical Center, New York, NY, USA.
Raymond ZouDepartment of Microbiology & Immunology, Columbia University Medical Center, New York, NY, USA.ORCID http://orcid.org/0000-0002-4059-5155
Wanwei ZhangDepartment of Microbiology & Immunology, Columbia University Medical Center, New York, NY, USA.ORCID http://orcid.org/0000-0001-9949-1206
Yinshan FangDepartment of Medicine, Columbia Center for Human Development, Columbia University Medical Center, New York, NY, USA.ORCID http://orcid.org/0000-0001-9249-4498
Yingyu ZhangDepartment of Microbiology & Immunology, Columbia University Medical Center, New York, NY, USA.
Miao ChenDepartment of Microbiology & Immunology, Columbia University Medical Center, New York, NY, USA.
Sophia PengDepartment of Microbiology & Immunology, Columbia University Medical Center, New York, NY, USA.
Uttiya BasuDepartment of Microbiology & Immunology, Columbia University Medical Center, New York, NY, USA.ORCID http://orcid.org/0000-0002-0185-7052
Jianwen QueDepartment of Medicine, Columbia Center for Human Development, Columbia University Medical Center, New York, NY, USA. jq2240@cumc.columbia.edu.ORCID http://orcid.org/0000-0002-6540-6701
Yuefeng HuangDepartment of Microbiology & Immunology, Columbia University Medical Center, New York, NY, USA. yh3102@cumc.columbia.edu.ORCID http://orcid.org/0000-0002-3860-5430

Funding

Improve Lung Regeneration Through Targeting Tuft Cells Following Viral InfectionR01HL159675 · NHLBI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI QUE, JIANWEN · 2021 to 2024
$2.4M
Elucidation of the regulation and function of innate lymphoid cellsR35GM138805 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI HUANG, YUEFENG · 2020 to 2024
$2.1M
VEGF/KDR Signaling in Airway Epithelial Regeneration and DiseaseR01HL152293 · NHLBI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI QUE, JIANWEN · 2021 to 2024
$2.0M
NHLBI NIH HHS R01 HL152293NHLBI NIH HHS R01 HL159675NIGMS NIH HHS R35 GM138805U.S. Department of Health & Human Services | NIH | National Heart, Lung, and Blood Institute (NHLBI) HL152293U.S. Department of Health & Human Services | NIH | National Heart, Lung, and Blood Institute (NHLBI) HL159675U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) 1R35GM138805
6 · The paper itself

Abstract

Tissue-resident immune cells such as innate lymphoid cells (ILC) are known to reside in the parenchymal compartments of tissues and modulate local immune protection. Here we use intravascular cell labeling, parabiosis and multiplex 3D imaging to identify a population of group 3 ILCs in mice that are present within the intravascular space of lung blood vessels (vILC3). vILC3s are distributed broadly in alveolar capillary beds from which inhaled pathogens enter the lung parenchyma. By contrast, conventional ILC3s in tissue parenchyma are enriched in lymphoid clusters in proximity to large veins. In a mouse model of pneumonia, Pseudomonas aeruginosa infection results in rapid vILC3 expansion and production of chemokines including CCL4. Blocking CCL4 in vivo attenuates neutrophil recruitment to the lung at the early stage of infection, resulting in prolonged inflammation and delayed bacterial clearance. Our findings thus define the intravascular space as a site of ILC residence in mice, and reveal a unique immune cell population that interfaces with tissue alarmins and the circulating immune system for timely host defense.

Indexed as

Immunity, InnateLungLymphocytesAnimalsDisease Models, AnimalFemaleMaleMiceMice, Inbred C57BLPseudomonas aeruginosaPseudomonas Infections

Identifiers

PMID40253407
PMCPMC12009297

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.